S
l.N Page No
Titles
o
Abbreviations used 12 - 13
1
Introduction
2 14 - 37
38 - 60
3 Review of Literature
LIST OF GRAPHS
DR - LUC CELL
HL – Human leukemia
ER – Estrogen receptor
NO – Nitric oxide
15d-PGJ2 - 15-deoxy-D12,14-prostaglandin J2
COX-2 - cyclooxygenase-2
GAPDH - glyceraldehyde phosphate dehydrogenase
PGE2 - prostaglandin E2
CANCER is the name for diseases in which the body's cells become abnormal and
divide without control. Cancer cells may invade nearby tissues. And they may spread
through the bloodstream and lymphatic system to other parts of the body.
Cancer is a group of many related diseases that begin in cells, the body's basic
unit of life. Normally, cells grow and divide to produce more cells only when the body
needs them. Sometimes, however, cells become abnormal and keep dividing to form
more cells without control or order, creating a mass of excess tissue called a tumor.
The cells in malignant tumors can invade and damage nearby tissue and organs.
Cancer cells can also break away from a malignant tumor and travel through the
bloodstream or lymphatic system to form new tumors in other parts of the body.
Most cancers are named for the organ or type of cell in which they begin. For
example, cancer that begins in the lung is lung cancer, and cancer that begins in cells in
When cancer cells spread (metastasize) from their original location to another part
of the body, the new tumor has the same kind of abnormal cells and the same name as the
primary tumor. For example, if lung cancer spreads to the brain, the cancer cells in the
brain are actually lung cancer cells. The disease is called metastatic lung cancer (it is not
brain cancer).
Use the links below to find information on specific types of cancer, including
treatment options, expertise at The James, clinical trials, and frequently asked questions.
Formation of Cancer
cells (columnar epithelium) and glands that produce mucus and other fluids. In healthy
lungs, these cells divide in a controlled and orderly way. But when a cell becomes
cancerous, it can continue to reproduce even when new cells aren't needed.
Although it may take years for lung cancer to develop, changes in lung tissue can
begin almost immediately after your lungs are exposed to the cancer-causing substances
(carcinogens) in cigarette smoke. With repeated exposure, normal cells are increasingly
damaged, and eventually some may become cancerous. Because of the way lung cancer
cells behave and because these cells have easy access to a large number of blood and
lymph vessels, cancerous cells may spread to other parts of your body before you ever
experience symptoms.
Types of Cancer
Common Cancers
When you breathe in, air passes from your nose or mouth through the windpipe
(trachea), which divides into two tubes (airways), one going to each lung. These are
known as the right and left bronchus and they divide to form smaller tubes called
bronchioles, which carry air through the lungs. At the end of the bronchioles are millions
of tiny air sacs called alveoli. In the alveoli, oxygen is absorbed from the air and passes
Carbon dioxide is a waste gas that must be removed from the body. It passes from
the bloodstream into the alveoli and is then breathed out by the lungs.
The right lung has three main areas (known as lobes) and the left lung has two
lobes. Many lung cancers start in the cells lining the bronchi and are called
Lung Cancer
Lung cancer is the leading cause of cancer deaths in the United States, among
both men and women. It claims more lives than colon, prostate, lymph and breast cancer
co Lung cancer is the uncontrolled growth of abnormal cells in one or both of the lungs.
While normal lung tissue cells reproduce and develop into healthy lung tissue, these
abnormal cells reproduce rapidly and never grow into normal lung tissue. Lumps of
cancer cells (tumors) then form and disrupt the lung, making it difficult to function
properly.
More than 87% of lung cancers are smoking related. However, not all smokers
develop lung cancer. Quitting smoking reduces an individual's risk significantly, although
former smokers remain at greater risk for lung cancer than people who never smoked.
Exposure to other carcinogens such as asbestos and radon gas also increases an
Lung cancer is the second most common cancer, accounting for about one out of
five malignancies in men and one out of nine in women. Unfortunately, over the past
several years, while the incidence of lung cancer has gradually declined in men, it has
been rising alarmingly in women. In 1940 only seven women in 100,000 developed the
disease; today the rate is 42 in 100,000. And all the evidence points to smoking as the
cause. As one specialist in the field reports, “How long it takes to get cancer depends on
how may cigarettes you smoke a day.” However, studies prove that quitting smoking does
Yet most of these lung cancer deaths could have been prevented. That's because
smoking accounts for nearly 90 percent of lung cancer cases. Although your risk of lung
cancer increases with the length of time and number of cigarettes you smoke, quitting
smoking, even after many years, can significantly reduce your chances of developing the
disease. Protecting yourself from exposure to other leading causes of lung cancer, such as
advanced stage when the outlook for recovery is poor. Although the survival rates for ung
cancer have improved, they remain much lower than those of many other types of cancer.
Generally cancer is divided into four stages: small and localised (stage one); has
spread into surrounding structures (stages two or three); or has spread to other parts of the
body (stage four). If the cancer has spread to distant parts of the body, this is known as
The staging is different for small cell and for non-small cell cancers of the lung.
Mesothelioma
There are two main types of primary lung cancer which behave and respond to
About I in 5 lung cancers are small cell, the rest are non-small cell.
Small cell lung cancers are divided into just two stages. This is because small cell
lung cancer often spreads outside the lung quite early on. Even if the doctor cannot see
any spread of the cancer on your scans, it is likely that some cancer cells will have broken
away and travelled through the bloodstream or lymph system. To be safe, small cell lung
cancers are usually treated as though they have spread, whether any secondary cancer can
be seen or not.
Limited disease – the cancer cells can be seen only in one lung, in nearby lymph
Extensive disease – it is clear that the cancer has spread outside the lung, within
There are three main types of non-small cell lung cancer. Sometimes it is not
possible to tell which type someone has. This is because when the cells are looked at
under a microscope they are not developed enough. The three types are:
Mesothelioma
A less common type of cancer that can affect the covering of the lungs is called
mesothelioma. It is a cancer of the membrane which covers the surface of the lungs and
lines the inside of the chest. It often occurs in people who have been exposed to asbestos.
Mesothelioma is not discussed here, but we have a separate section about this type
of cancer.
Stage 1 cancer is very localised and has not spread to the lymph nodes. This
Stage 1B the cancer is larger than 3cm, or it is growing into the main airway of
the lung (bronchus). The cancer may also have spread into the inner covering of
Stage 2A the cancer is small, measuring 3cm or less in size, and nearby
Stage 2B the cancer is larger than 3cm and in the nearby lymph nodes,
OR there is no cancer in the lymph nodes, but the tumour has grown into
the chest wall, the outer covering of the lung (pleura), the muscle layer
below the lungs (diaphragm), the covering of the heart, or it has made the
Stage 3A the cancer is of any size and has spread into the lymph
OR, the cancer has spread into tissue around the lung near to where the cancer started.
This can be into the chest wall, the covering of the lung (pleura), the middle of the chest
Stage 3B the cancer has spread to lymph nodes on either side of the chest or
Stage 4 lung cancer has spread to a distant part of the body, such as the liver or
the brain.
Causes of lung cancer
Lungs are two large, spongy organs shaped something like an upside-down
butterfly. Every time you inhale, air is carried through the windpipe to your lungs in two
major airways (bronchi). Inside your lungs, the bronchi subdivide over 15 times into a
million smaller airways (bronchioles), which finally end in clusters of tiny air sacs called
alveoli. Within the air sacs, oxygen is absorbed into your bloodstream and carbon
Other causes
Tobacco
Cigarette smoking is known to be the cause of most lung cancers. Lung cancer
can also develop in people who do not smoke, although this is much rarer. The risk of
developing lung cancer increases with the number of cigarettes smoked, and if people
start to smoke at a young age. Filtered and low tar cigarettes may slightly reduce a
person’s risk of developing cancer, but it is still far greater than that of a non-smoker.
than 3,500 chemicals, at least 40 of which are known carcinogens. Cigarettes also contain
more than 30 toxic metals, including nickel and cadmium, as well as radioactive
compounds.
Lung cancer that begins in the lungs (primary lung cancer) is uncommon in
nonsmokers, but cancer of the breast, colon, prostate, testicle, kidney, thyroid, bone or
other organs may spread to the lungs. In that case, the cancer is still referred to by the
name of the organ in which it originated, rather than being called lung cancer. There's no
connection between smoking and the spread of cancer cells to the lungs from other parts
of the body.
• Chest pain
• Shortness of breath
• increasing breathlessness
• a dull ache, or a sharp pain, when you cough or take a deep breath
• difficulty swallowing
Lung cancer also may cause fatigue, loss of appetite and weight loss. If it has
spread to other parts of your body (metastasized), you may have headaches or bone pain.
If you have any of the above symptoms, it is important to have them checked by
your doctor, but any of these symptoms may be caused by illnesses other than cancer.
Chemotherapy
Is the main treatment for small cell lung cancer. In many people, chemotherapy
for small cell lung cancer will enable them to live for longer, with better control of
chemotherapy and radiotherapy are given at the same time: this is known as
chemoradiation.
Surgery
Is not usually used to treat small cell cancer, except if the cancer is found very
early. This is because the cancer has usually spread to other parts of the body before
chemotherapy or radiotherapy may be given after surgery to kill any possible remaining
cancer cells and reduce the risks of the cancer coming back. Giving treatment in this way
RADIOTHERAPY
To make sure that the radiotherapy works as well as possible, it has to be carefully
planned. On your first few visits to the radiotherapy department you will be asked to lie
under a large machine called a simulator, which takes x-rays of the area to be treated.
Side effects - Radiotherapy can cause general side effects, such as feeling sick (nausea),
tiredness, Skin care and Hair loss.. It can also cause flu-like symptoms for a few days, or
chest pain.
There are over 60 types of chemotherapy drug. Those most commonly used to
treat lung cancer include cisplatin, carboplatin, gemcitabine, vinorelbine, paclitaxel and
docetaxel.
Side effects - Chemotherapy can cause unpleasant side effects.The main side effects are
described here, along with some of the ways they can be reduced. Lowered resistance to
infection,Bruising or bleeding ,Anaemia (low number of red blood ,cells) ,Feeling sick ,
reducing the high number of lung cancer deaths each year. Yet, that is only part of the
solution. On the latest research front, scientists are studying methods to actually prevent
the development of lung cancer through natural and synthetic materials. In addition,
researchers believe that legislation designed to dissuade people from starting to smoke,
coupled with efforts to help people quit, will have a positive impact on the number of
On the surface of many types of cancer cells, are structures known as epidermal
growth factor receptors (EGFRs). The receptors allow epidermal growth factor ( a
particular protein present in the body) to attach to them. When the epidermal growth
factor (EGF) attaches to the receptor, it causes chemical processes inside the cell that
EGFR as receptor
Growth factors are proteins that control the everyday function of cells in the body.
However some diseases such as cancer and psoriasis are associated with abnormal
activity of these growth factor driven processes. One such growth factor is the epidermal
growth factor (EGF) which stimulates cells by binding to a large protein on the surface
called the 'epidermal growth factor receptor'. The EGF receptor was the first of its type to
be discovered and there has been intense interest and activity around the world to
understand the molecular details of its structure and the way it binds EGF
The epidermal growth factor (EGF) receptor is one of the first discovered growth
determined about its mechanism of action. Several members of the Epithelial laboratory
have been part of a collaboration with members of the Walter and Eliza Hall Institute and
the Health Sciences and Nutrition division of the CSIRO determined the structure of a
substantial fragment of the extracellular domain of the EGF receptor together. One of its
ligands, the transforming growth factor alpha (TGF-alpha), is also present in this
structure. A specific binding site is the receptor you wish to study. All of the other
The protein - the epidermal growth factor (EGF) receptor - was detected on
cancer cells over 20 years ago and laboratories all over the world have been trying to
has been shown to play a critical role in regulating tumor cell growth, repair and survival,
human tumors. Furthermore, EGFR expression is correlated with poor prognosis and
decreased survival in numerous cancers. Therefore, it has been postulated that agents
designed to block EGFR activity will inhibit phosphorylation and signal transduction,
resulting in multiple antitumor mechanisms, as well as enhancing chemotherapy and
Possible mechanisms for this effect have been proposed. In the case of
chemotherapy, it has been suggested that EGFR inhibitors and cytotoxic therapy are
likely to augment apoptosis in malignant cells. The synergism of EGFR inhibitors and
radiation therapy may occur by various mechanisms, including variations in the cell
cycle, preventing DNA repair post-radiation, and the inhibition of key cellular signaling
man-made chemical that is being used in research trials to treat some types of cancer. It is
Some trials have shown that iressa can partially shrink cancer tumours in some
patients with advanced cancer (cancer which has already spread) who have already
received standard treatments for their particular type of cancer. However the drug had no
effect on some patients in the trials. When a drug reduces the size of a tumour the effect
may not last and the tumour may increase in size again after a short time.
Curcumin
3T3 cells expressing human EGF-R. Treatment of cells with a saturating concentration of
EGF for 5-15 min induced increased EGF-R tyrosine phosphorylation by 4- to 11-fold
and this was inhibited in a dose- and time-dependent manner by up to 90% by Curcumin,
which also inhibited the growth of EGF-stimulated cells. There was no effect of
Curcumin treatment on the amount of surface expression of labeled EGF-R and inhibition
Purpose: In a search for alternative and preventive therapies for prostate cancer,
attention was focused on the ways in which Curcumin (Turmeric), used in food and
medicine in India for centuries, could interfere with the growth factor signaling pathways
How it works
Curcumin works by blocking (inhibiting) signals within the cancer cells, which
prevents a series of chemical reactions that cause the cell to grow and divide. It is known
On the surface of many types of cancer cell are structures known as epidermal
growth factor receptors (EGFRs). The receptors allow epidermal growth factor (a
particular protein present in the body) to attach to them. When the epidermal growth
factor (EGF) attaches to the receptor, it causes a chemical called tyrosine kinase to trigger
Curcumin attaches itself to the EGF receptor inside the cell, which blocks the
activation of tyrosine kinase, and switches off the signals from the EGFR. It therefore has
the potential to stop the cancer cells from growing. It works in a different way to both
intracellular enzyme (tyrosine kinase) of the EGFR to directly block signals turned on by
The activity of epidermal growth factor and its receptor, the EGFR, have been
identified as key drivers in the process of cell growth and replication. Heightened activity
at the EGF receptor, whether caused by an increase in the concentration of ligand around
mutation, can lead to an increase in the drive for the cell to replicate. There is now a body
of evidence to show that the EGFR-mediated drive is increased in a wide variety of solid
tumours, including non-small cell lung cancer, prostate cancer, breast cancer, gastric
cancer, colon cancer, ovarian cancer and tumours of the head and neck.
kinases associated with transmembrane cell surface receptors, including the tyrosine
kinases associated with the epidermal growth factor receptor (EGFR-TK). EGFR is
expressed on the cell surface of many normal cells and cancer cells
receptors the cancer may be more likely to develop quickly and also more likely to spread
to other parts of the body (metastasise). EGF receptors are found on many types of cancer
cells including non-small cell lung cancer, breast cancer, cancer of the bowel (colon and
rectum) and prostate cancer. Theoretically iressa could be used to treat any of these types
of cancer, but has so far been shown to be most effective against non-small cell lung
cancer. Current trials will show which other types of cancer it is active against.
Curcumin does not appear to cause many side effects. So far, the main side effects
have been:
Diarrhoea: This can usually be easily controlled with medicine but tell your doctor if it
An acne-like rash: This may be sore and itchy and your doctor can prescribe medicines
Turmeric in India
India has a rich history of using plants for medicinal purposes. Turmeric
(Curcuma longa L.) is a medicinal plant extensively used in Ayurveda, Unani and Siddha
medicine as home remedy for various diseases (Ammon and Wahl, 1991; Eigner and
perennial plant having a short stem with large oblong leaves and bears ovate, pyriform or
countries, including China and South East Asia. It is also considered as auspicious and is
a part of religious rituals. In old Hindu medicine, it is extensively used for the treatment
of sprains and swelling caused by injury (Ammon and Wahl, 1991). In recent times,
traditional Indian medicine uses turmeric powder for the treatment of biliary disorders,
anorexia, coryza, cough, diabetic wounds, hepatic disorders, rheumatism and sinusitis . In
China, C. longa is used for diseases associated with abdominal pains (Araujo and Leon,
2001). The colouring principle of turmeric is the main component of this plant which
Food Sources
Tumeric, is the dried ground rhizome of Curcuma longa L. (Joe et al., 2004). It is
used as a spice in Asian and Middle Eastern cuisines. Curcuminoids comprise about 2-9%
Constituent Amount
Protein 6.3%
Fat 5.1%
Minerals 3.5%
Carbohydrates 69.4%
Moisture 13.1%
Essential oil 5.8%
α-phellandrene 1%
Sabinene 0.6%
Cineol 1%
Borneol 0.5%
Zingiberene 25%
Sesquiterpines 53%
Diferuloylmethane 3–4%
Curcumin (Diferuloylmethane) (3–4%) is responsible for the yellow colour, and
comprises curcumin I (94%), curcumin II (6%) and curcumin III (0.3%) (Ruby et al.,
1995). Demethoxy and bisdemethoxy derivatives of curcumin have also been isolated
(Fig :3) (Vopel et al., 1990). Curcumin was first isolated (Vogel and Pelletier, 1815) in
1815 and its chemical structure was determined by Roughley and Whiting in 1973. It has
a melting point at 176–177°C; forms a reddish-brown salt with alkali and is soluble in
ethanol, alkali, ketone, acetic acid and chloroform (Roughley and Whiting, 1973).
The active substance of turmeric is the polyphenol curcumin, also known as C.I.
keto and enol (Fig : 4 & 5). The keto form is preferred in solid phase and the enol form in
Curcumin and its derivatives and many other extracts from the rhizomes were
found to be bioactive. (Araujo and Leon, 2001). Curcumin has healing effect on both
aseptic and septic wounds in rats and rabbits (Gujral et al., 1953). Extensive literature
available on the biological activities of curcumin and some of the significances are
summarized in table :
conjugated in the intestine and liver to form curcumin glucuronides and curcumin sulfates
have the same biological activity as the parent compound. In one study, conjugated or
expression in cultured human colon cells than curcumin itself (Ireson et al., 2001) . In a
clinical trial conducted in Taiwan, serum curcumin concentrations peaked 1-2 hours after
an oral dose, and peak serum concentrations were 0.5, 0.6 and 1.8 micromoles/liter at
doses of 4, 6 and 8 g/day, respectively (Cheng et al., 2001). Curcumin could not be
Curcumin decreases the severity of pathological changes and thus protects from
improves Ca2+-transport and its slippage from the cardiac muscle sarcoplasmic
defective Ca2+ homeostasis in the cardiac muscle (Sumbilla et al., 2002). Curcumin has
1971).
Anticoagulant activity
induced platelet aggregation in vitro as well as in vivo in rat thoracic aorta (Srivastava et
al., 1985)
Antidiabetic effect
Curcumin prevents galactose-induced cataract formation at very low doses
Suryanarayan et al., 2003). Both turmeric and curcumin decrease blood sugar level in
alloxan-induced diabetes in rat (Arun and Nalini, 2002). Curcumin also decreases
al., 1998) .
Antibacterial activity
Both curcumin and the oil fraction suppress growth of several bacteria like
aqueous extract of turmeric rhizomes has antibacterial effects (Kumar et al., 2001).
Curcumin also prevents growth of Helicobacter pylori CagA+ strains in vitro (Mahady et
al., 2002).
Antifungal effect
Ether and chloroform extracts and oil of C. longa have antifungal effects
(Banerjee and Nigam, 1978, Misra andd Sahu, 1977, Apisariyakul et al., 1995). Crude
ethanol extract also possesses antifungal activity (Wuthi et al., 2000). Turmeric oil is also
Antiviral effect
Curcumin has been shown to have antiviral activity (Araujo and Leon, 2001). It
acts as an efficient inhibitor of Epstein-Barr virus (EBV) key activator Bam H fragment z
left frame 1 (BZLF1) protein transcription in Raji DR-LUC cells (Hergenhahn et al.,
transforming growth factor-beta increase the level of BZLF1 m-RNA at 12–48 h after
treatment in these cells, which is effectively blocked by curcumin (Hergenhahn et al.,
virus) activity by inhibiting the HIV-1 integrase needed for viral replication (Mazumdar
et al., 1995, De Clercq, 2000). It also inhibits UV light induced HIV gene expression
(Taher et al., 2003). Thus curcumin and its analogues may have the potential for novel
Antivenom effect
Bothrops venom and 70% lethal effect of Crotalus venom in mice (Araujo and Leon,
faeces and only a little in the urine (Wahlstrom and Blennow, 1978; Ravindranath and
Chandrasekhar, 1980). Only traces of curcumin are found in the blood from the heart,
liver and kidney. Curcumin, when added to isolated hepatocytes, is quickly metabolized
hexahydrocurcumin (Pan et al., 1999, Holder et al., 1978) Curcumin, after Metabolism in
It induces Apoptosis and inhibits cell-cycle progression, both of which are instrumental in
preventing cancerous cell growth in rat aortic smooth muscle cells (Chen and Huang,
tyrosine kinase and c-myc mRNA expression and the apoptotic effect may partly be
mediated through inhibition of protein tyrosine kinase, protein kinase C, c-myc mRNA
expression and bcl-2 mRNA expression (Chen and Huang, 1998). Curcumin induces
apoptotic cell death by DNA-damage in human cancer cell lines, TK-10, MCF-7 and
been shown to cause apoptosis in mouse neuro 2a cells by impairing the ubiquitin–
proteasome system through the mitochondrial pathway (Jana et al., 2004). Curcumin
to activate caspase 9 and caspase 3 for apoptotic cell death (Jana et al., 2004). Recently,
colon cancer cell and role of heat shock proteins (hsp) thereon (Rashmi et al., 2004). In
this study, SW480 cells were transfected with hsp 70 cDNA in either the sense or
antisense orientation and stable clones were selected and tested for their sensitivity to
curcumin. Curcumin was found to be ineffective to cause apoptosis in cells having hsp
70, while cells harbouring antisense hsp 70 were highly sensitive to apoptosis by
release of cytochrome c, activation of caspase 3 and caspase 9 and other parameters for
is correlated to carcinogenesis and curcumin has been shown to induce apoptosis in K562
a, 2003). The mechanism of curcumin-induced apoptosis has also been studied in Caki
cells, where curcumin causes apoptosis through down regulation of Bcl-XL and IAP,
2003). In LNCaP prostrate cancer cells, curcumin induces apoptosis by enhancing tumour
combined treatment of the cell with Curcumin and TRAIL induces DNA fragmentation,
cell line, Curcumin delays apoptosis along with the arrest of cell cycle at G1 phase (Chen
et al., 1996). Curcumin also reduces P53 gene expression, which is accompanied with the
induction of HSP-70 gene through initial depletion (Chen et al., 1996) of intracellular
(Gautam et al., 1998). That curcumin induces apoptosis and large-scale DNA
production (Cipriani et al., 2001). Curcumin induces apoptosis in human leukaemia HL-
60 cells, which is blocked by some antioxidants (Kuo et al,. 1996). Colon carcinoma is
(TIMP)-1, two common effector molecules involved in cell invasion (Shao et al,.2002). It
also induces apoptosis through P53-dependent Bax induction in human breast cancer
cells (Choudhuri et al., 2002). However, Curcumin affects different cell lines differently.
Whereas leukaemia, breast, colon, hepatocellular and ovarian carcinoma cells undergo
apoptosis in the presence of Curcumin, lung, prostate, kidney, cervix and CNS
malignancies and melanoma cells show resistance to cytotoxic effect of Curcumin (Khar
et al., 2001). Curcumin also suppresses tumour growth through various pathways. Nitric
oxide (NO) and its derivatives play a major role in tumour promotion. Curcumin inhibits
iNOS and COX-2 production (Brouet and Ohshima, 1995) by suppression of NFkB
activation (Surh et al., 2001). Curcumin also increases NO production in NK cells after
2000). Curcumin also induces apoptosis in AK-5 tumour cells through up regulation
(Khar et al., 1999) of caspase-3. Reports also exist indicating that curcumin blocks
1998). Recently, in Jurkat cells, curcumin has been shown to prevent glutathione
depletion, thus protecting cells from caspase-3 activation and oligonucleosomal DNA
thymocytes (Sikora et al., 1997) .These strongly imply that cell growth and cell death
share a common pathway at some point and that curcumin affects a common step,
the cell cycle before it can divide again. Following DNA damage, the cell cycle can be
transiently arrested to allow for DNA repair or activation of pathways leading to cell
death (apoptosis) if the damage cannot be repaired (Stewart et al., 2003). Defective cell
cycle regulation may result in the propagation of mutations that contribute to the
development of cancer. Curcumin has been found to induce cell cycle arrest and
apoptosis in a variety of cancer cell lines grown in culture (Duvoix et al., 2005). The
mechanisms by which curcumin induces apoptosis are varied but may include inhibitory
effects on several cell signaling pathways. However, not all studies have found that
curcumin induces apoptosis in cancer cells. Curcumin inhibited apoptosis induced by the
tumor suppressor protein p53 in cultured human colon cancer cells (Moos et al., 2004;
Tsvetkov et al., 2005), and one study found that Curcumin inhibited apoptosis induced
metalloproteinases. Curcumin has been found to inhibit the activity of several matrix
metalloproteinases in cell culture studies (Banerji et al., 2004; Ohashi et al., 2003;
Menon et al., 1999). Invasive tumors must also develop new blood vessels to fuel their
rapid growth by a process known as angiogenesis. Curcumin has been found to inhibit
angiogenesis in cultured vascular endothelial cells (Thaloor et al., 1998) and in an animal
Cancer
different mechanisms has generated scientific interest in the potential for curcumin to
prevent some types of cancer (Sharma et al., 1955-68). Oral curcumin administration has
oral (Krishnaswamy et al., 1998; Li et al ., 2002), stomach (Ikezaki et al., 2001; Huang
et al., 1994), liver (Chuang et al., 2000), and colon (Pereira et al., 1996; Rao et al.,
1995; Kawamori et al., 1999) cancer. ApcMin/+ mice have a mutation in the Apc
(adenomatous polyposis coli) gene similar to that in humans with familial adenomatous
colorectal adenomas (polyps) and a high risk for colorectal cancer. Oral curcumin
ApcMin/+ mice (Mahmoud et al., 2000; Perkins et al., 2002). In contrast, oral curcumin
administration has not consistently been found to inhibit the development of mammary
(breast) cancer in animal models (Pereira et al., 1996; Singletary et al., 1998; Huang et
al., 1998).
Although the results of animal studies are promising, particularly with respect to
colorectal cancer, there is presently little evidence that high intakes of Curcumin or
turmeric are associated with decreased cancer risk in humans. A phase I clinical trial
patients with precancerous lesions of the mouth (oral leukoplakia), cervix (high grade
observed in 2 out of 7 patients with oral leukoplakia, 1 out of 4 patients with cervical
intraepithelial neoplasia, 2 out of 6 patients with squamous carcinoma in situ and 1 out of
with oral leukoplakia and 1 out of 4 patients with cervical intraepithelial neoplasia by the
end of the treatment period. This study was designed mainly to examine the
bioavailability and safety of oral Ccurcumin, and interpretation of its results is limited by
the lack of a control group for comparison. As a result of the promising findings in
animal studies, several controlled clinical trials in humans designed to evaluate the effect
Drug Interactions
Curcumin has been found to inhibit platelet aggregation in vitro (Shah et al.,
heparin, ticlopidine (Ticlid) and warfarin (Coumadin). In cultured breast cancer cells,
enough to inhibit cancer chemotherapeutic agents in humans (Garcea et al., 2004). it may
be advisable for women undergoing chemotherapy for breast cancer to avoid curcumin
piperine may also increase the bioavailability and slow the elimination of a number of
drugs, including phenytoin (Dilantin), propranolol (Inderal) and theophylline (Bano et al.,
pharmacology the present study has been undertaken to design a structure based drug of
curcumin componds and choose the best drug by employing few basic bioinformatic
tools.
CADD methods and bioinformatics tools offer significant benefits for drug
discovery programs.
Cost Savings.
The Tufts Report suggests that the cost of drug discovery and development has
reached $800 million for each drug successfully brought to market. Many
biopharmaceutical companies now use computational methods and bioinformatics tools
to reduce this cost burden. Virtual screening, lead optimization and predictions of
bioavailability and bioactivity can help guide experimental research. Only the most
promising experimental lines of inquiry can be followed and experimental dead-ends can
be avoided early based on the results of CADD simulations.
Time-to-Market.
The predictive power of CADD can help drug research programs choose only the
most promising drug candidates. By focusing drug research on specific lead candidates
and avoiding potential “dead-end” compounds, biopharmaceutical companies can get
drugs to market more quickly.
Insight.
One of the non-quantifiable benefits of CADD and the use of bioinformatics tools
is the deep insight that researchers acquire about drug-receptor interactions. Molecular
models of drug compounds can reveal intricate, atomic scale binding properties that are
difficult to envision in any other way. When we show researchers new molecular models
of their putative drug compounds, their protein targets and how the two bind together,
they often come up with new ideas on how to modify the drug compounds for improved
fit. This is an intangible benefit that can help design research programs.
CADD and bioinformatics together are a powerful combination in drug research
and development.
Curcuma longa is a ginger-like plant that grows in tropical regions. The roots
contain a bright yellow substance (turmeric) that contains curcumin and other
curcuminoids. Turmeric has been used in Ayurvedic and Chinese medicine for centuries.
But it's only within the past few years that the extraordinary actions of curcumin against
Curcumin can stop cancer in its earliest stages, long before it's detectable. It
works at the level of the cell. One of the things it does is to tell damaged cells to self-
destruct so they won't keep multiplying. The process is called "apoptosis" and it's the
body's way of destroying abnormal cells that can become cancerous. Cancer cells can
circumvent the process, but curcumin can override them and send "self-destruct" signals
to many different types of cancer cells. Curcumin does not induce apoptosis of healthy
cells, only cancerous ones. It identifies cancer cells by their abnormal chemistry.
Unfortunately, it doesn't work in all types of cancer, but Indian researchers may have
figured out why. Their findings, published in the Journal of Biological Chemistry, may
therapeutic target for cancers. Lung cancer cell lines are variably dependent on autocrine
stimulation of EGFR since it has a role in signal transduction, which results in cell
effects of a selective EGFR tyrosine kinase inhibitor zd1839 (iressa), on proliferation and
survival of lung cancer cell lines by using docking software tools (vega zz).Using
chemskecth I have designed 3 new drug molecules(iressa A,iressa B & Iressa C ) on the
basis of iressa drug, and compared the commercial iressa drug and natural curcumin
drug by docking it on EGFR protein by using vega ZZ software on the basis of energy
score A found that curcumin will be the best inhibitor than standard Iressa drug . Again
on comparing the ADME properties of commercial drug iressa , modified drugs and
natural curcumin drug ( by using ADME tool ),I found that this natural curcumin drug
will act as more efficient drug to inhibit EGFR protein and stop signal transduction which
is the major step in causing lung cancer.This natural curcumin drug has to be proved in
wet lab also. It can be used further in clinical trials to test it effectiveness and for social
benefit.
The objective of this project is to uncover some of the aspects of lung cancer,
The study, proposed herewith, adds weight to the growing body of science linking
consumption of the spice to decreased risk of certain cancers, like Lung cancer. "Our
anticancer agent.
The anti-cancer effects of spices from curcumin to red chili pepper capsaicin have
been consistently researched. The lowest incidence of both Lung and Brest cancers is
observed in Asia and the Far East, in particular India and China, and this has been linked
Using PC-3 human prostate cancer cell lines grown in vitro, the researchers
observed that curcumin decreased the expression of a protein associated with malignant
tumor formation called MDM2. The turmeric extract was also found to increase the
expression of a protein that increases programmed cell death (apoptosis) of the cancer
cells.
To test the efficacy of curcumin in vivo, the researchers grafter PC-3 prostate
cancer cells into a group of nude mice, and then assigned to receive either curcumin or
cottonseed oil (placebo) orally for five days per week for four weeks.
The curcumin-fed mice were further divided into three groups with five animals
per group. One group continued to receive only curcumin supplements, while the others
effects of gemcitabine and radiation. In these tumors, curcumin reduced the expression of
action that may be essential for its chemopreventive and chemotherapeutic effects," they
concluded.
Ricardo Sanchez-Ortiz, MD, who was not involved in the study, said: "These
exciting data suggest that this dietary supplement should be studied in combination with
pathway."
Several studies suggested that curcumin inhibits growth of malignant cells via
growth factor receptor (EGFR) is also inhibited by curcumin in vitro and in vivo.
signaling and the COX-2 pathway. Our aim was to evaluate whether the curcumin
inhibitory effect on the survival of cancer cells is associated with simultaneous down-
signaling pathway.: Lung and pancreas adenocarcinoma cell lines co-expressing EGFR
(PC-14 and p34, respectively) and those expressing EGFR but deficient in COX-2
(H1299 and Panc-1, respectively) were exposed for 72 h to curcumin (0-50 microM).
Cell viability was assessed by the XTT assay. Curcumin's inhibitory effect on survival
and apoptosis of lung and pancreatic adenocarcinoma cell lines was significantly higher
in the COX-2-expressing cells than in the COX-2-deficient cells. In the p34 and PC-14
cells, curcumin decreased COX-2, EGFR and p-Erk1/2 expressions in a dose-dependent
manner.
activity.
cells.
PUBCHEM
PubChem is a database of chemical molecules. The system is maintained by the
National Center for Biotechnology Information (NCBI), a component of the National
Library of Medicine, which is part of the United States National Institutes of Health
(NIH). PubChem can be accessed for free through a web user interface. Millions of
compound structures and descriptive datasets can be freely downloaded via FTP.
PubChem contains substance descriptions and small molecules with fewer than 1000
atoms and 1000 bonds. because they claim it competes with their Chemical Abstracts
Service. More than 80 database vendors contribute to the growing PubChem database.
PUBMED
PubMed is a free search engine for accessing the MEDLINE database of citations
and abstracts of biomedical research articles. The core subject is medicine, and PubMed
covers fields related to medicine, such as nursing and other allied health disciplines. It
also provides very full coverage of the related biomedical sciences, such as biochemistry
and cell biology. It is offered by the United States National Library of Medicine at the
National Institutes of Health as part of the Entrez information retrieval system. As with
other indexes, the inclusion of an article or journal in PubMed is not endorsement. In
2007 MEDLINE contained over 17,000,000 records from more than 5,000 journals
published in the United States and more than 80 other countries primarily from 1950
onwards.
DRUGBANK
The Drug Bank database is a unique bioinformatics and chem. informatics
resource that combines detailed drug (i.e. chemical, pharmacological and pharmaceutical)
data with comprehensive drug target (i.e. sequence, structure, and pathway) information.
The database contains nearly 4800 drug entries including >1,480 FDA-approved small
molecule drugs, 128 FDA-approved biotech (protein/peptide) drugs, 71 nutraceuticals
and >3,200 experimental drugs. Additionally, more than 2,500 non-redundant protein (i.e.
drug target) sequences are linked to these FDA approved drug entries.
PDB
The Protein Data Bank (PDB) is a repository for 3-D structural data of proteins
and nucleic acids. These data, typically obtained by X-ray crystallography or NMR
spectroscopy and submitted by biologists and biochemists from around the world, are
released into the public domain, and can be accessed for free.
THERAPEUTIC TARGET DATABASE (TTD)
A database to provide information about the known and explored therapeutic
protein and nucleic acid targets, the targeted disease, pathway information and the
corresponding drugs/ligands directed at each of these targets. Also included in this
database are links to relevant databases that contain information about the function,
sequence, 3D structure, ligand binding properties, enzyme nomenclature and related
literatures of each target. This database currently contains 1535 targets and 2107
drugs/ligands.
DESCRIPTION OF TOOLS USED
CHEMSKETCH
ACD/ChemSketch is an advanced chemical drawing tool and is the accepted
interface into the industry's best NMR and molecular property predictions, nomenclature,
and analytical data handling software. ACD/ChemSketch is also available as freeware,
with functionalities that are highly competitive with other popular commercial software
packages. The freeware contains tools for 2D structure cleaning, 3D optimization and
viewing, InChI generation and conversion, drawing of polymers, organometallics, and
Markush structures—capabilties which are not even included in some of the commercial
packages from other software producers. Also included is an IUPAC systematic naming
capability for molecules with fewer than 50 atoms and 3 rings. The capabilities of
ACD/ChemSketch can be further extended and customized by programming.
VEGA
VEGA ZZ is the evolution of the well known VEGA OpenGL package and
includes several new features and enhancements making your research jobs very easy.
VEGA was originally developed to create a bridge between most of the molecular
software packages only, but in the years, enhancing its features, it's evolved to a complete
molecular modelling suite. This software is FREE for non-profit academic uses.
CORINA
CORINA is a program for the fast and efficient generation of high-quality three-
dimensional molecular models .Fast and Efficient Generation of High-Quality Three-
Dimensional Molecular Models. CORINA software generates low energy conformation,
three-dimensional atomic coordinates from a molecule’s connection table data. CORINA
converts a higher rate of two-dimensional structures than other programs, and is
applicable to the entire range of organic chemistry as well as many organometallic
compounds. CORINA will generate 3D coordinates for the given structure. A new page
will be generated showing the 3D molecular model if you have RASMOL, CHIME, or
some similar program installed on your computer).
RASMOL
RasMol is an excellent and free molecular viewer available for Windows,
Macintosh and UNIX platforms. RasMol is a computer program written for molecular
graphics visualization intended and used primarily for the depiction and exploration of
biological macromolecule structures, such as those found in the Protein Data Bank. It was
originally developed by Roger Sayle in the early 90s.
ADMETOX
ADMETox is poor absorption, distribution, metabolism, elimination (ADME) and
Literature search:
log on to www.pubmed.com
provided
Go to the home page of protein data bank(pdb) with the help of www.rcsb.org/pdb
type the protein name in advanced search column and click the “search” button
From the list of hits select ids whichever you need and click on id
click on the download option which is present in left corner of the result page
save the protein structure as pdb file format and the structure visualize by rasmol
www.genome.jp/kegg/drug .
From the list of hits displayed, select the chemical compound of interest
there.
http://www.molecular-networks.com/online_demos/corina_demo.html
• Paste your input (smiles ) which are downloaded from pubchem compund
database
• In the next page select download file option and click on it.
“search”button
• select first option download acd/labs freeware and click on the option
• In the Escher page Load probe(drug) and target (protein) for docking
folder.
• Calculate the score and the minimum conformation of the complex molecule
• Choose the best score (high score) of the complex molecule (protein- drug
molecule).
The target protein structure is retrieved from Protein data Bank .The wire frame
model of the Protein structure is visualized and analyzed by RasMol version 2.6.
Retrieving drug compound
The ligand drug compound is retrieved from the pubchem compound database.
The stick model of the drug compound is visualized and labeled by the RasMol
Version2.6
Modification of drug compound
The drug compound is modified by using chemsketch off line software. It helps to
draw molecules, reactions, and schematic diagrams, calculate chemical properties, and
The structure of the drug compound is modified by using the buttons located on
the structure toolbar, Atoms toolbar and references toolbar and calculated the elemental
composition, formula, weight of the drawn structure(s), and chemical property of the
selected structure. By using this tool we can also Calculate the molar refractivity, molar
volume, index of refraction, surface tension, density, and some other physicochemical
server. The 3D structure of drug molecule is visualized and analyzed by the visualizing
Ligand-Receptor Docking
In compliance to the idea that every “lock” has a “key”, we can construct, search and
match various molecules to the active site of a receptor. The goal is to use knowledge of the
ligand and the receptor to make predictions if and how they will form a non-covalently
bonded complex.
Here a ligand is a small organic molecule with a size of about 10 to 200 atoms. The
receptor is a protein, usually of a much larger size than the ligand. Predictions can be made as
to how the ligand and receptor will interact to form a complex. The computational approach
It can be assumed that for a complex formed by a native ligand and its receptor
corresponds to a state in which the free binding energy is minimal. With this knowledge the
docking problem becomes an energy minimization task to find the lowest free energy binding
mode for receptor and a putative ligand. In general, there are two aims of docking studies:
Docking
Drug compounds are docked with the target protein molecule by using Vega zz .
Steps undertaken
generated by docking inhibitors to target protein, once docking is completed we can generate
PDB file of solutions by using –s commands at ESCHER console and can interpret the result
• Calculate the score and the minimum conformation molecule of both inhibitors.
• Compare the interaction energy with the help of interaction energy graph.
• Comparative Analysis:-After generating the solution file of all drugs compare the
score and minimum energy conformation molecule of all drugs.
Goals of Docking
• Characterize binding site - make an image of binding site with interaction points
G )
target
enhancements making research jobs very easy. VegaZZ contains several features that are not
ESCHER consists of three modules that work in series to perform docking procedure.
The three modules and their work to perform docking are as following:
II) Usage
The required files to run ESCHER are the probe and the target in PDB format without
hydrogens . (TARGET and PROBE are the file names of the target and probe molecules).
Probe and target are the partners witch best orientation will be find by ESCHER maximizing
Vega ZZ accepts mainly PDB, msf. Csr, .dat files as input to view the molecules.
ESCHER NG generates three types of output files that one can identify by the extension:
1. PDB:- It's the solution extracted with the -s option. It contains the probe only and it is
needed to open the target and the extracted files in preferred molecular graphic package if
Sol:- It's the output text file including the solutions. ESCHER NG creates two solutions files
named *_1.sol and *_2.sol. where * is the name of the target and the probe separated by a
dash (-). The first contains the all computed solutions, and the second contains the clustered
The above three files are generated in the directory that contain target and probe
molecules. To perform docking the both target and probe molecules should be in same
directory.
After generating all the files .PDB, .sol, .srf. Solutions are extracted from .sol file by
using –s command. This option allows to extract the solutions from the ESCHER output file
(*_2.sol). The SOLUTION_ID is the solution number in the output file, and the trajectory is
used to save all the solutions generated by going to file/save trajectory as on VegaZZ tool
bar.To view the the result generated in solution file we can open the solution file in word pad.
starting with the # character. The file format scheme is the following:
#ESCHERNG_VER
It’s file header and it's placed at the first line. This tag has got a version number
that identifies the type of the ESCHER output. At this time, the allowed version number
is 1. After the #ESCHER_VER tag the file can contain the date, user comments, etc
#Solutions
In this section the calculated solutions are included. The first two lines are the column
labels for best user readability. Each subsequent line is a solution and the meaning of each
Column Description
Sol. Solution number.
Score Total score (high score = best complex).
Rms Root mean square.
Bumps Number of atom collisions between target and probe.
Chg. Total charge score.
Pos. Positive <-> negative charge score.
Neg. Positive <-> positive and negative <-> negative charge score.
Apo. Apolar <-> apolar score.
Pol. Apolar <-> polar score.
RotX X rotation.
RotY Y rotation.
RotZ Z rotation.
TransX X translation.
TransY Y translation.
TransZ Z translation.
Table: The Solution output file of ESCHER NG.
The target protein epidermal growth factor receptor is retrived from Protein data
Bank .The PDB id of the epidermal growth factor receptor is 1MOX The Protein
structure is visualized by RasMol tool
Fig .1: Wire frame model of epidermal growth factor receptor
Fig: 1. Shows the three dimensional molecular structure of Epidermal growth
factor receptor which is retrieved from protein data bank and viewed it in different forms
like wire frame model by using Rasmol molecular visualization tool . . Rasmol is
window-based tool. The wire frame model clearly shows the chemistry of epidermal
growth factor receptor, from this we can easily trace of the sequence.
Protein databank from RCSB or MMDB provides the 3D molecular structure
data. The name of the protein epidermal growth factor receptor is entered on pdb home
page at text box. After that the type of viewer ( Rasmol) is selected and finally clicked to
display. Then 3D protein structure and its data also download as a pdb file and analysed
The ligand drug compounds are retrieved from the NCBI pubchem compound
database. The wireframe model of the drug compounds are visualized and labeled by the
being used in research trials to treat some types of cancer. It is also sometimes called
Fig :3. shows the structure of Curcumin which is retrived from Ncbi pubchem
compound databank
Fig 4: shows the modified Iressa drug A. the structure of Iressa has drawn in
chemsketch software and chlorine of standard Iressa drug is replaced by bromide then it
is named as Iressa A. The figure also shows the SMILES (simplified molecule input line
entry specification) and general properties of modified drug Iressa A.. molecular formula
of modified drug Iressa A is C22H24BrFN4O3, formula weight is 491.353, Nominal mass is
490 da, Avarae mass is 491.4 and surface tension 58.8 .
chemsketch software and chlorine and fluorine of standard Iressa drug is replaced by
bromide and Iodine then it is named as Iressa B . The figure also shows the SMILES
(simplified molecule input line entry specification) and general properties of modified
drug Iressa A.. Molecular formula of modified drug Iressa B is C 22H24BrIN4O3, formula
weight is 599.26, Nominal mass is 598 da, Avarae mass is 599.4 and surface tension 59.9
Structure of curcumin
Fig 6: shows the modified Iressa drug C. the structure of Iressa has drawn in
chemsketch software and chlorine of standard Iressa drug is replaced by bromide and
fluorine is removed from the structure . it is named as Iressa C . The figure also shows
the SMILES (simplified molecule input line entry specification) and general properties of
modified drug Iressa C.. molecular formula of modified drug Iressa C is C22 H25 Br N4 O3,
formula weight is 473.36, Nominal mass is 472 da, Avarae mass is 473.37 and surface
tension 56.8
C21 H24 O6, formula weight is 372.4, Nominal mass is 372 da, Avarae mass is 372.41 and
by online tool corina. The structure is visualized and labeled by rasmol molecular
visualization tool.
by online tool corina. The structure is visualized and labeled by rasmol molecular
visualization tool.
structure is converted by online tool corina. The structure is visualized and labeled by
Fig12: shows the three-dimensional structure of modified drug Iressa C . The 3-D
structure is converted by online tool corina. The structure is visualized and labeled by
Fig 13: shows the docked complex of the standard Iressa drug and Epidermal
growth factor recetpor . Figure12 also shows best frame is 100 and best docking score is
260.0
Epidermal growth factor receptor – Iressa A complex
Figure 13. : Shows the docked complex of the modified drug Iressa A and
Epidermal growth factor receptor. In this best docking frame is 99 and best docking
score is 255.0
Epidermal growth factor receptor – Iressa B complex
Figure 15. : Shows the docked complex of the modified drug Iressa A and
Epidermal growth factor receptor. In this best docking frame is 95 and best docking score
is 258.0
Epidermal growth factor receptor – Iressa C complex
Figure 16 : Shows the docked complex of the modified drug Iressa C and
Epidermal growth factor receptor. In this best docking frame is 94 and best docking score
is 262.0
Epidermal growth factor receptor – natural curcumin drug complex
Figure 17 : shows the docked complex of the Curcumin drug and Epidermal growth
factor receptor. In this best docking frame is 99 and best docking score is 271.0
Energy Calculations
interactions or solvation energies can be estimated. This allows for a detailed understanding of
protein epidermal growth factor receptor and the best conformation is:-
100 models are generated after Docking modified Iressa A drug to target
protein epidermal growth factor receptor and the best conformation is:-
Best Model: 99
100 models are generated after Docking modified Iressa B drug to target
protein epidermal growth factor receptor and the best conformation is:-
Best Model: 95
100 models are generated after Docking modified Iressa C drug to target
protein epidermal growth factor receptor and the best conformation is:-
Best Model: 94
100 models are generated after Docking natural curcumin drug to target
protein epidermal growth factor receptor and the best conformation is:-
Best Model: 99
This figure shows docking results and interaction energy values of drug receptor
complex. light blue color indicate docking score and the red color indicates interaction
energy value. from this graph curcumin epidermal growth factors receptors complex
having highest docking score and interaction energy values.there fore curcumin has the
Figure shows the molecular weight of natural drug curcumin , commercial durg
Iressa and modified iressa durgs. Molecular weight of curcumin is 372, iressa is 446.7,
iressa A is 491.2, Iressa B is 599.1 and Iressa C is 473.2. Based on the Lipinski 5 rule the
drug must have the molecular weight below 500. Curcumin has the lowest molecular
This figure shows the number of hydrogen donors present in the selected drugs
curcumin and iressa. Curcumin has 2 H-donors , Iressa -1 , iressa A -1, Iressa B- 1 ,and
Iressa C-1. According to Lipinski rule of 5 the durg must have the hydrogen donors
This figure shows the Hydrogen bond acceptors of curcumin , Iressa and Iressa
analogues. Curcumin has 6 hydrogen bond acceptors, Iressa has 7, Iressa A has 7, Iressa
B has 7, and Iressa C has 7. According to lipinski’s rule of 5 the drug should have the
This figure shows the Log P values ( partition coefficient) of curcumin , Iressa ,
Iressa A, iressa B and iressa C. the log P value of curcumin is 2.64, Iressa is 3.18, Iressa
A is 3.36 and Iressa B is 4.26 and iressa C is 3.19. according to the lipinski’s rule the drug
which is having lowest log P value it will be a best drug . from this graph result
curcumin is the best inhibitor having the lowest partition coefficient value is 2.64.
The above figure shows the comparison of Log p and H – donor and H- acceptor
values of the drugs. The blue color indicates hydrogen bond donors, pink color indicates
hydrogen bond acceptors and the light green color indicates Partition coefficient ( log P).
based on the lipinski’s rule of 5 the durg must have the hydrogen bond donors below 5
,hydrogen bond acceptors below 12 and partition coefficient( log P) value is below 5
.from the graph curcumin has the best result when compare to other durgs.
Lipinski's Rule of Five states that, in general, an active drug has no more than one
violation of the following criteria:
• Not more than 5 hydrogen bond donors (nitrogen or oxygen atoms with one or
more hydrogen atoms)
• Not more than 10 hydrogen bond acceptors (nitrogen or oxygen atoms)
• A molecular weight under 500 g/mol
• A partition coefficient log P less than 5
SUMMARY
The target protein epidermal growth factor receptor (EGFR) is identified and
retrieved from Protein data Bank .The PDB id of the epidermal growth factor is 1MOX.
The Protein structure is visualized and active site amino acids are anylysed by RasMol
tool. The wire frame model structure of epidermal growth factor receptor (EGFR) is
Iressa and curcumin are important epidermal Growth factor receptor inhibitors
(EGFR). The structure of EGFR inhibitors has found in the pubchem compound database.
The 2D structure of curcumin and Iressa drug is retrieved from NCBI pubchem compund
database. The physiochemical parameters of these two inhibitors are analysed. Physio
chemical properties and the structural details of are shown in (Figure 2 and Figure 3).
in standard Iressa drug and they are named as Iressa A, Iressa B and Iressa C. In Iressa A
modification and phsiochemical property details of all the drugs are shown in (Figure 4,
conversion tool. 3D structures of all the drugs are anlysed and visulalised in rasmol tool
then they are saved in pdb file format. 3D structural details of all the drugs are shown in
Docking steps are done in VegaZZ software. Commercial drug Iressa is docked
with EGFR to form protein ligand complex, The docking score of Iressa with EGFR is
260 (Figure 13) and binding enery score of Iressa is 289 (Figure.18). All the modified
drugs are docked with its target protein Epideraml Growth Factor Receptor, docking
score and interaction energy values ae shown in (Figure, 14, Figure 15 and Figure 16).
The natural compound curcumin is docked with its target edpidermal growth factor
receptor. Docking score and interaction enery value is caluculated (Figure 17).
automatics docking system. Comparision of interaction energy value and docking score
modified drugs Iressa A, Iressa B, and IressaC was predicted using ADME Boxes and
ADME Toxes Tools. Molecular weight of all the five drugs are predicted and values are
given in (Graph 2). Nurmber of Hydrogen bond donars and H bond acceptors are
calculated (Graph 3 and Graph 4). Partation coefficient value (Log P) of all the five drugs
Comparisons of all physio chemical properties of all the five drugs are shown in
(Graph 6). Based on the lipinski’s rule of 5 the durg must have the hydrogen bond donors
below 5, hydrogen bond acceptors below 12 and partition coefficient( log P) value is
below 5. From graphical result all the drugs are passed lipinski’s 5 rule.
The epidermal growth factor receptor (EGFR) has been reviewed. This protein is
involved in disease lung cancer and can consider as a successful drug target
Curcumin is the best inhibitor:-On comparing the interaction energy graph of all
inhibitors
1. Standard drug Iressa shows the score 260.0
2. Modified Iressa A drug shows score 255.0
3. Modified Iressa B drug shows the score 258.0
4. Modified Iressa C drug shows the score 262.0
5. Natural curcumin drug having best result score 271.0
6. Since highest the score best is the complex.
7. Since highest the score lower is the energy so according to energy graph and the
energy ranges it is concluded that curcumin is the best inhibitor having the
highest score of 271.0
Curcumin could be considered as a possible drug as it scores the
highest in the interaction energy graph.on comparing the ADME properties of
commercial drug iressa, modified drugs and natural curcumin drug ( by using
ADME tool ), I found that this natural curcumin is passed ADME screening and
lipinski rule of 5 .natural curcumin drug will act as more efficient drug to inhibit
EGFR protein and stop signal transduction which is the major step in causing lung
cancer.This natural curcumin drug has the potential to be used for second generation
of drug development. It has to be proved in wet lab also. It can be used further in
clinical trials to test it effectiveness and for social benefit.
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