C5
head
Hemi-
C10
Mono-
tail
2-Methyl-1,3-butadiene
(Isoprene)
2-Methylbutane
tail
head
2,6-Dimethyloctane
C15
Sesqui- 2,6,10-Trimethyldodecane (Farnesane)
C20
Di-
2,6,10,14-Tetramethylhexadecane (Phytane)
tail
C25
head
Sester- 2,6,10,14,18-Pentamethylicosane
tail
C30
Tri-
tail
2,6,10,15,19,23-Hexamethyltetracosane (Squalane)
tail
C40
Tetra-
(C5)n
tail
,-Carotene
all-trans-Polyisoprene (Guttapercha)
Polyterpenes
1.3 Biosynthesis
1.3 Biosynthesis
Acetyl-coenzyme A, also known as activated acetic acid, is the biogenetic precursor
of terpenes (Figure 1) 9-11. Similar to the CLAISEN condensation, two equivalents of
acetyl-CoA couple to acetoacetyl-CoA, which represents a biological analogue of
acetoacetate. Following the pattern of an aldol reaction, acetoacetyl-CoA reacts
with another equivalent of acetyl-CoA as a carbon nucleophile to give -hydroxy-methylglutaryl-CoA, followed by an enzymatic reduction with dihydronicotinamide
adenine dinucleotide (NADPH + H+) in the presence of water, affording (R)mevalonic acid. Phosphorylation of mevalonic acid by adenosine triphosphate
(ATP) via the monophosphate provides the diphosphate of mevalonic acid which is
decarboxylated and dehydrated to isopentenylpyrophosphate (isopentenyldiphosphate, IPP). The latter isomerizes in the presence of an isomerase containing SH
groups to ,-dimethylallylpyrophosphate. The electrophilic allylic CH2 group of
,-dimethylallylpyrophosphate and the nucleophilic methylene group of isopentenylpyrophosphate connect to geranylpyrophosphate as monoterpene. Subsequent
reaction of geranyldiphosphate with one equivalent of isopentenyldiphosphate
yields farnesyldiphosphate as a sesquiterpene (Fig. 1).
H H
CONH2
O
N
HO
OH
OH
O P O P O
O
NH2
OH
N
O
HO
O P OH
OH
N
O
OH
HO P O P O P O
OH
NH2
OH
N
O
HO
O P OH
OH
O
CoAS
+ CoAS
nucleophile
biological
CLAISENcondensation
electrophile
acetoacetyl-CoA
(biological acetoacetic acid ester)
CH3
O
CoAS
O
O
+ H
SCoA
+ H2O HSCoA
HO CH3 O
-hydroxy--methyl-glutaryl-CoA
HO2C
SCoA
+
(NADPH + H )
HSCoA
HO CH3
HO2C
OH
(R)-mevalonic acid
(ATP)
HO CH3
Mevalonic acid diphosphate
HO2C
O
OPP
PP =
OH
CO2, H2O
,-dimethylallylpyrophosphate
(Isomerase)
OPP
OPP
OPP
OPP
OH
isopentenylpyrophosphate
(activated isoprene)
HOPP
OPP
P O P OH
geranylpyrophosphate
(monoterpene)
, HOPP
farnesylpyrophosphate
(sesquiterpene)
1.3 Biosynthesis
However, failing incoporations of 13C-labeled acetate and successful ones of 13Clabeled glycerol as well as pyruvate in hopanes and ubiquinones showed isopentenyldiphosphate (IPP) to originate not only from the acetate mevalonate pathway,
but also from activated acetaldehyde (C2, by reaction of pyruvate and thiamine
diphosphate) and glyceraldehyde-3-phosphate (C3) 12. In this way, 1-deoxypentulose-5-phosphate is generated as the first unbranched C5 precursor of IPP.
HO
CO2
C
H3C
H O
+ z OH
HO
CH3
activated
acetaldehyde
CO2H
N
H
C
S
C +
CH3
pyruvic acid
thiamine
diphosphate
z OPP
CH3
H
O z
N
S
CH3
HO
H O z
z OH
z OH
z OPP
z OPP
OH
OPP
z
squalene (triterpene)
2 F-PP , - HOPP, tail to tail linkage
farnesylpyrophosphate F-PP
(sesquiterpene)
OPP
+
OPP
OPP
OPP
isopentenyldiphosphate
(IPP)
1-deoxypentulose-5-phosphate
HOPP
geranylgeranylpyrophosphate GG-PP
(diterpene)
OPP
OPP
geranylpyrophosphate
(R+S)-limonene
1.3 Biosynthesis
OPP
farnesylpyrophosphate
1,3,11-elematriene
COPE rearrangement
H+
H+
1(10),4,11-germacratriene
2,6,9-humulatriene
+ H+
*
*1,2-hydride shift
1,2-methyl shift
1(10),11-guajadiene
1,11-eudesmadiene
1,11-eremophiladiene
16
15
OPP
13
20
18
11
3
19
5
7
geranylgeranylpyrophosphate
3,7,11,15-cembratetraene
(cembrene A)
1,3-sigmatropic
hydrogen shift
iso-geranylgeranylpyrophosphate
1,2-hydride shift
pimarane skeleton
Table 2. Isoprenoids
[C5]n
polyterpenes (polyprenes)
(h - t)
hemiterpenes
C5
(h - t)
+ C5
C10
monoterpenes
2x
C15
sesquiterpenes
(t - t)
2x
C20
(t - t)
(h - t)
+ C5
C25
C30
triterpenes
(h - t)
+ C5
diterpenes
t : tail
(h - t)
+ C5
sesterterpenes
h : head
insertion into other
natural compounds
C40
tetraterpenes
(carotenoids)
C27
C24
C21
C19
C18
Steroids
1.3 Biosynthesis
2,3-Epoxysqualene has been shown by isotope labeling to be the biogenetic precursor of tetracyclic triterpenes with perhydrocyclopenta[a]phenanthrene as the basic
skeleton (also referred to as gonane or sterane). Steroids 13 are derived from these
tetracyclic triterpenes. These include cholestanes (C27), pregnanes (C21), androstanes (C19) with trans fusion of the rings A and B (5), estranes (C18) with a benzenoid ring A (estra-1,3,5-triene; Fig. 4) 9,10 as well as cholic acid and its derivatives (C24) with cis fusion of the rings A and B (5). The biogenetic origins of tetracyclic triterpenes and steroids are summarized in Table 2.
21
H
O
H
2,3-epoxysqualene
(protonated)
1130 13
9
19
HO
29
25
27
15
1
3
23
17
21
18
dammarane-3-ol
28
23
18
HO
13
19
10
H
8
25
14
27
30
H
C30 : lanostane-3-ol
21
18
19
10
5
HO
23
13
H
8
H
C27 : 5-cholestane3-ol
18
25
OH
13
19
10
5
HO
H
8
18
13
19
H
C21 : 5-pregnane3-ol
24
22
18
14
21
23
10
5
HO
10
5
H
8
14
H
8
13
CO2H
Steroids
C
A
18
14
H
C19 : 5-androstane3-ol
13
19
HO
21
27
14
10
5
14
C18 : estra-1,3,5(10)-triene3-ol
H
8
HO
OH
H
C24 : 3,7,12-trihydroxy5-cholanic acid (cholic acid)