I.
II.
INTRODUCTION
108
109
111
112
114
115
IV.
115
118
121
127
127
130
132
1
This is an expanded version of the invited lecture presented by one of us (I.P) at
the Nobel Workshop on the ' Chemical Origin and Early Evolution of Life' held in
Stockholm on 7-8 December, 1970.
[107]
108
V.
138
138
140
141
142
VI.
VII.
REFERENCES
145
I. INTRODUCTION
It is generally accepted that the present biological order reflects the effect
of structures acquired during a long evolution (Lwoff, 1962): it is the
capacity to capture and transmit past experience that characterizes the
living systems. The remarkable fact is that this idea of biological evolution, which emerged in the nineteenth century, appears to be really
conflicting with the idea of evolution formulated in thermodynamics:
(a) In biology or in sociology, the idea of evolution is associated with
an irreversible increase of organization giving rise to the creation of more
and more complex structures.
(b) In thermodynamics and statistical mechanics, the second law is
formulated as the Carnot-Clausius principle. In its modern version, the
content of this law is as follows. There exists a function, the entropy S,
which depends on the macroscopic state of the system. For systems
exchanging energy and matter with the surroundings, the entropy
variation dS during a time dt may be decomposed as
dS = deS + diS,
(1)
where de<S is the entropyflowfrom the surroundings and diS the entropy
production from irreversible processes inside the system. The second law
then implies that for all physical processes
diS^o,
(2)
(3)
QRB 4
110
111
112
gradient) drives the system sufficiently far from equilibrium that the
system may give rise to ordered, highly co-operative structures.
In all these phenomena a new ordering principle not reducible to the
Boltzmann order principle appears. In the B6nard instability there
exists also a competition (Glansdorff & Prigogine, 1971) but of completely
different dynamical type, as it involves dissipative processes (in this case
viscous dissipation and dissipation of heat) and convection through
fluctuations. There exists therefore a second ordering principle which we
may call briefly 'order through fluctuations'.
113
114
115
- - / dVa
(er^o).
(4)
(5)
We obtain a bilinear form summed over all irreversible processes i, of
suitably defined flows (or rates) Jt associated with these irreversible
processes, and of generalized forces X t giving rise to these flows. In the
Il6
si.
"/*^
Jt = XLyX,,
(7)
>
WRT\
< 1,
(8)
where R is the gas constant. Inequality (8) is generally not satisfied except
in the immediate neighbourhood of equilibrium. In the general case, it is
necessary to adopt non-linear phenomenological laws. We notice that
the local equilibrium assumption may still be valid beyond the domain of
linear relations, equation (7) (Glansdorff & Prigogine, 1971).
Within the linear region, two quite general theorems may be proven
which have both wide implications. In the first place, Onsager has shown
that it is always possible to choose the flows and forces such that the
matrix [Li3] be symmetrical (Onsager, 1931 a, b):
Ui = hi-
(9)
(i=i,...,y),
(10)
and at the same time the coefficients L{j become constants. Consider
finally the entropy production a per unit volume and time as a function
of the generalized forces {X^(i = 1, ...,y). It has then been proven by
I.Prigogine (1947; see also Glansdorff & Prigogine, 1971) that a is a
minimum at the steady state with respect to variations of the generalized
forces compatible with the boundary conditions. This minimum entropy
production theorem proves that o~ is a non-equilibrium state function
playing the same role as the thermodynamic potentials in equilibrium
theory. In particular the minimum property guarantees the stability of
the steady state. Alternatively, the theorem provides an evolution criterion,
as it implies that a physical system will necessarily evolve to the steady
non-equilibrium state starting from an arbitrary state close to it. The whole
evolution is thus cast in a compact thermodynamic principle. Analytically
this may be expressed in the form
ldt^o.
(11)
Il8
JXdJ
119
(14)
In (14) it is understood that i is such that the affinities^ are all independent. This may always be achieved by forming suitable linear combinations of velocities and affinities of the individual reactions. With this
choice of vit J&t the equality in (14) implies that
vt = o at the steady state.
(15)
Imagine now that the steady state of the system is perturbed as a result of
a random fluctuation or of an external disturbance. Let Svt, Bs^i be the
fluctuations in vi,s#i:
(17)
Suppose now 8xcr < o. Then according to inequality (14) its variation
will also be negative and Sx a will never go to zero. In other words, the
120
(18)
(19)
From equilibrium stability theory one has (Glansdorff & Prigogine, 1971)
8zs < o.
(20 a)
On the other hand, one can show straightforwardly (Glansdorff &
Prigogine, 1971) that
(21a)
121
(216)
Recently it has been shown (Glansdorff & Prigogine, 1971; Lax, i960;
Nicolis & Babloyantz, 1969; Nicolis, 1971) that Einstein's fluctuation
theory may be extended to non-equilibrium states, at least for wide
classes of model systems. Equation (21 b) is now replaced by
Poc exp [(d2S)ol2k]
(22)
where (S2S)0 is calculated around a steady non-equilibrium state. Comparing with equation (20) we see that one can now understand the
mechanism of an instability in terms of fluctuation theory. Starting with
(S2S)0 < o around some reference state, the system will always remain
close and finally decay to this state which will correspond to the most
probable configuration, as long as (dl8t)(d2S)0 is positive. On the other
hand, for (d\ 8t) (S2S)0 negative, P will first decrease. The system will then
evolve to a new regime corresponding to the most probable state.
III.
C H E M I C A L I N S T A B I L I T I E S IN HOMOGENEOUS MEDIA
Fig. 1
3
In fluctuation theory is considered to be a function of a set of macroscopic
observable quantities {a,, ..., an}, with n <g N; N being the number of degrees of
freedom of the system.
122
It is understood that the system {X, Y,...,} is open to {A}, {F} and
subject to time-independent conditions. It is convenient to measure the
deviation from equilibrium by the value of some parameter R which
depends on the overall affinity, i.e. on the ratios of {A}, {F} and on the
equilibrium constant. The first point to notice in the system just described
eq
123
(23)
124
(246)
Physically, this implies that products D and E are removed as soon as they
are produced. The affinity of the corresponding reactions tends then to
infinity, i.e. the system operates at 'infinite distance' from equilibrium.
Once this is admitted, a further simplification will be adopted which consists in neglecting back reactions in the remaining two steps involved in
(23). The scheme thus becomes completely irreversible. Still, it is
possible to define the continuation of the thermodynamic branch, which
is simply given by the homogeneous steady-state solution
X0 = A,
Y0 = B/A.
(25)
Let us assume for simplicity that the system evolves in a single spacedimension, r. The chemical kinetic equations representing (23) read
(we take the limit of an ideal mixture):
(26)
Fig. 3. Approach to a limit cycle in the model (23) for A = 1, B = 3 and for
different initial conditions.
126
(a)
o
U
0-5
Space (arbitrary units)
on the diffusion coefficients Dx, D Y . ForB slightly beyond Bc, fluctuations with wavelength around a critical value Ac depending on A, Z)x, DY
are amplified and the system leaves state (25). Itfinallystabilizes to a new
steady state which now is space-dependent (Lefever, 1968 a, b). Figure 4
represents the spatial distribution of X and Y in this state. The wavelength of the spatial periodicity is roughly determined by Ac, which is the
wavelength of the fastest-growing fluctuation beyond the transition.
127
128
The simplicity of equations (26) and (28) lies thus in the fact that A obeys
a closed equation which may be solved to completely determine A(r, t).
System (26) is then to be solved for X and Y only, A being a given
function of r.
The solution of equations (26) and (28) will be subject to the following
boundary conditions:
(29)
We first study the steady-state solution of equations (26) and (28) reducing
to state (25) in the limit Z) A -x, corresponding to a uniform distribution
of A. This generalized ' thermodynamic solution' corresponds now to a
non-uniform configuration and cannot be determined exactly. Rather,
it has been necessary to perform numerical calculations combined with the
use of the local potential variation technique (Herschkowitz-Kaufman &
Platten, 1971). The result is shown in Figs. 5 and 6. We notice that the
form of X and Y is still very closely approximated by equation (25)
(with A now depending on r) and is only slightly modified by diffusion.
The next step is to study the stability of the profiles shown in Fig. 6.4
Again the problem cannot be solved exactly because of the space-dependence of the coefficients of equation (26). It is still possible, however, to
apply the same variational technique as before (Herschkowitz-Kaufman
& Platten, 1971). The result is the non-equilibrium phase diagram shown in
Fig. 7. For simplicity the parameters A, DA and D x have been held
constant. We see that one may define on Fig. 7 three domains:
(a) A stable domain, I. Fluctuations around steady states belonging to
this domain regress in time.
(b) An unstable domain, II, where steady states undergo instabilities.
The increase of fluctuations is monotonic in this domain.
4
Equation (28) determines a single steady-state profile for A(r) (Fig. 5) which is
always stable.
15
15
10
10
129
o
U
0
0-5
Space (arbitrary units)
15
and
* 10
o
ions
- 10
--
:ent
2 5
c
0
0-5
Space (arbitrary units)
Fig. 6. Steady-state'solution of equations (26) reducing to the 'thermodynamic' solution (25) in the limit of uniform distribution of A. T h e following
numerical values have_been chosen: Z) x = I'OS x io~ 3 , JD Y = 5 2 5 x io" 3 ,
B = 2 6 0 , X = 140, Y = 186.
Fig. 7. Stability diagram in the B-DY plane for A = 14-0, DA = 197 x io" 3 ,
D x = 1 05 x io~ 3 .
130
(30)
A=
J97X
=
IO 3
~ .
05 x I0 3
M
~'
X=A = n-o,
*L
A = 14-0,
D =
5 2 x I0 3
"5 ~'[
7=5/^=1-86.1
(31)
Equations (26) have been integrated numerically by setting A at its steady state
(cf. Fig. 5). This is justified by the fact that Ao is always a stable configuration and by
the choice D A > D X) D y which implies that the concentration profile A relaxes very
rapidly to Ao.
131
15
r\ r\
"5
r\
c 10
o
10
uo
0
0-5
Space (arbitrary units)
132
(32)
The problem is, again, to study the evolution in time of the perturbations
x(r, t) and y(r, t) around the steady-state profiles of X and Y. For the
numerical values given in (32) the latter are of a form similar to that given
in Fig. 5 and are not reproduced here. The space o ^ r ^ / = i i s now
divided into 39 intervals by points 1-40. The numerical calculations
6
This non-uniqueness property is a direct consequence of the non-linearity of the
system.
have again been performed on the CDC 6400 computer of the University
of Brussels.
The result is, first, that the steady state is unstable and the system now
attains asymptotically, a dissipative structure which is both space and
time-dependent. This regime is rapidly stabilized to a time periodic
state. Figs. 9-12 show the space-dependence of X corresponding to
30-1
- 30
t = 9 636
"o 2
2 0 -
- 20
b 10-
-10
504 0
"
trary
1 = 30 "
ntrat
-50
t=14-95-<
II
ft
- J\
'
g 1 . 10-
- 40
-30
- 20
I ^ - - -10
u
i
Fig. io. Spatial distribution of X during the part of the period corresponding
to a slow build-up of X at points 9 and 31.
134
extremely rapid; it only lasts A* ~ 0-33 (cf. Fig. 11). Finally (cf. Fig. 12)
the two propagating fronts ' collide' and X decreases slowly to the initial
profile. The duration of this part is A* ~ 2-50. After this the whole
phenomenon repeats and the system passes through exactly the same
stages.
t=15-281
70-
-70
-60
-50
50-
X
"5 40
-40
I 30
-30
20-
-20
10-
-10
Fig. 11. Spatial distribution of X during the rapid propagation of the two
wavefronts toward the middle point.
70 -1
-70
t=15-283
60
-60
"5 ? 50-
-50
40-
-40
30-
-30
20-
-20
10-
-10
gl
2 is
*->
C
L.
*-
O-2U
Fig. 12. Spatial distribution of X during the slow overall decrease of concentration to the initial profile.
The results reported in Figs. 9-12 imply that the system exhibits a
wave-like solution. This is also confirmed by the observation that in the
region between the two build-up points (cf. Fig. 10) the system performs
locally discontinuous or relaxation oscillations (Lavenda, Nicolis &
Herschkowitz-Kaufrnan, 1971). Fig. 13 represents the form of these
oscillations for the middle point 20. Oscillations also extend a little
160
X 40 "o
c
o
S 20 o
U
12
16
20
24
28
Fig. 13. Time variation of the concentration of X at the middle point (point 20).
farther than the build-up points but in the form of small amplitude,
smooth periodic motions. The main point is, however, that these local
oscillations do not organize to form a standing wave. Rather, during a
part of the overall motion, there are two stages corresponding to the
propagation of wavefronts, either outwards (cf. Fig. 9) or inwards (cf.
Fig. 11). Tiie velocity of propagation of these fronts, in addition to its
dependence on the parameters, depends also on the local concentration
of X. For instance at the build-up point 9 (cf. Fig. 10), where propagation
first starts, the maximum value of concentration, i.e. the concentration
at the wavefront, is X9 ~ 43-0 and the propagation velocity is c9 ~ o-66.
At point i i , Xn ~ 58-0 and cn ~ 0-90, while at point 16, Xie ~ 62-5 and
c16 ~ 0-94. We see that the propagation velocity increases with concentration and rapidly reaches a saturation value. This property is the result
of the non-linear character of the wave due to the non-linearity of the
chemical kinetic equations (26).
136
For the same values of the parameters the velocity of spread of X due
to a simple diffusion would be
or
Ar ~
Cut 0*04.
137
At ~ 0-33 or 130. For the same choice of numerical values the overall
period of the wave is equal to 8-4. The dependence of the phase difference
on the local value of concentration is non-linear. Let us emphasize that
the existence of a phase difference seems to be due to diffusion rather
than to any difference between periods of oscillations of the individual
points. In fact, as we observed before, individual periods synchronize to a
single, overall period characteristic of the wave.
The result that a set of chemical kinetic equations such as equations (26)
which form a parabolic system, may give rise to wave-like solutions is due
to some very interesting analytic properties of these equations. A detailed
analytic study, however, meets with several difficulties and is presently
under investigation by Narasimha, Nicolis & Herschkowitz-Kaufman
(1971). We only notice here that preliminary studies indicate that during
the propagation phases (cf. Figs. 9, 11) the system of equation (26)
behaves as a hyperbolic system. On the other hand, during the build-up
phase (cf. Fig. 10) and the slow-motion phase represented in Fig. 12 the
motion is practically determined from the local limit cycle behaviour and
from diffusion, whose effect is to modify the amplitude of oscillations and
give rise to phase differences between various points.
We conclude this discussion of localized dissipative structures by
stressing once more the striking differences in the functions performed by
the system in these states and in the states on the thermodynamic branch.
First, it is reasonable to expect that localization is a plausible mechanism
for stabilizing a dissipative structure with respect to abrupt changes of
the chemical environment. On the other hand, a characteristic property
of localized structures is to produce great amounts of a particular substance during a short period of time (cf. Fig. 13) and in a limited region of
space (cf. Figs. 8, 11). This is a very efficient way to perform regulatory
functions involving thresholds and being sharply localized in space and
time. Finally, concentration waves are a plausible mechanism for propagation and transmission of information in the form of chemical signals,
whereas the steady-state localized structures could be useful, as we saw
before, for the storage of information. The biological significance of such
functions will be discussed in V and VI.
I38
b0
"+1.
-jT = bi_1Si_1-biSi
(i =
(33)
2,...,n+i).
Walter shows that for n, p sufficiently large (in any case n ^ 2, p > 2) a
limit cycle is possible. Further examples of limit cycles in catalytic
reactions involving negative feedback have been worked out by SePkov
(1968 a, b), Spangler & Snell (1961, 1967), Morales & McKay (1967).
As we saw in III and IV, if a non-linear chemical system operating
far from equilibrium becomes unstable with respect to some type of
fluctuation (leading, for example, to limit cycle formation), it is quite
likely that for different boundary conditions it also gives rise to other
6.
Fig. 14. Different stages of formation of the dissipative structure shown in
Fig. 15. First-stage: temporal oscillation. Second stage: appearance of a
small inhomogeneity. Last four stages: appearance and propagation of spatial
patterns in the form of horizontal bands. Temporal oscillations are still
present.
QUARTERLY REVIEWS OF H I O P H YS I CS, 4, 2 & 3
facing p. 138
Fig. 15. Spatial dissipative structure for the Zhabotinski reaction: the
Ce3+ and Ce4+ ions are assembled in alternative horizontal bands (dark lines
represent an excess concentration of Ce3+).
140
particular, Sel'kov was able to show that the experimental data can be
interpreted in terms of a mechanism involving an unstable transition
point and a limit cycle thereafter. In his model the allosteric character
of phosphofructokinase is taken into account through a phenomenological
factor, y, describing the stoichiometry of its activation by ADP (7 > 1).
Recently, Goldbeter & Lefever (1971) have constructed a model taking
into account explicitly the allosteric effects and which is free from phenomenological factors. Again the agreement between the predictions and the
experimental data is very satisfactory.
Oscillations have also been reported to occur in the synthesis of enzymes in the cellular level. Theoretical studies attribute these effects to the
induction and repression mechanisms of the Jacob-Monod type (Monod
& Jacob, 1961; Griffith, 1968). We do not expand this point here, as the
experimental evidence is much weaker than for enzymic reactions.
V. 3. Symmetry-breaking instabilities and concentration waves
The intimate relation between limit cycle and spatial structure formation
which was repeatedly stressed in this section suggests that the systems
under V. 2 could also give rise to spatially ordered states. This point was
further developed by Prigogine et al. (1969). In particular it was shown
that for values of the parameters in the physiological range, Sel'kov's
model for glycolysis predicts a symmetry-breaking transition. An experimental verification of this prediction is, however, lacking.
The emergence of spatial order and the transmission of information in a
previously homogeneous system is also a central problem in embryogenesis and, more generally, in all problems involving cell differentiation.
The localized dissipative structures of the type studied in IV may
provide the basis for a quantitative study of such information transfer
processes. Moreover the existence of chemical waves substantiates the
concept of 'organizing waves' recently postulated in the literature
(Wolpert, 1968; Cohen, 1969). The main feature of these waves is that
the concentration of a characteristic morphogen is periodic and the phase
of the oscillation is controlled via a wavelike propagation mechanism. In
IV we have shown that all these features may arise in certain classes of
non-linear chemical reactions operating beyond instability.9
9
An analysis of morphogenetic processes in terms of the stability properties of the
evolution equations has also been made by Thorn (1971). Furthermore, Keller & Segel
(1970) have been able to analyse the first stages of slime mold aggregation in terms of
the stability properties of the equations of evolution of the chemical substances
mediating the aggregation.
142
The question of space order formation in the cellular and macromolecular level is one of the deepest problems in biology which remains
practically open. Intuitively it is difficult to avoid the feeling that spatial
dissipative structures have not contributed, in an essential way, to the
first biogenetic steps and therefore implicitly, to the formation of the
macromolecular and cellular structures themselves. In particular, the
possibility of creating, in a limited region of space, concentrations of
certain key substances by order of magnitudes larger than in the homogeneous, prebiotic mixture, may be very significant in the process of
evolution. Once these substances are assembled together the probability
for certain important reactions is enhanced and the system begins to
evolve to biologically relevant configurations.10
The whole point requires further study. Additional comments are also
made in the subsequent section.
V. 4. Multiple steady states
The problem of multiple steady states is of primary importance in all
phenomena involving the' all-or-nothing' type of transition. For instance,
for suitable critical values of parameters a system may depart abruptly
from a steady state and go to a new one which has, roughly speaking, the
same symmetry as the former but differs in the level of concentration of
certain characteristic substances.
There exist at least two types of all-or-nothing effects in biology: the
process of differentiation in higher organisms and the functioning of
excitable membranes.
(i) The problem of differentiation. Monod & Jacob (1961) have proposed
a number of models describing differentiation. One of these models has
been analysed by Cherniavskii, Grigorov & Polyakova (1967) and by
Babloyantz & Nicolis (1971). They find indeed that there exist critical
regions where the system can switch to a regime such that a given type of
substance is produced preferentially. A different type of model, also
suggested by Monod & Jacob, is completely independent of the metabolic
activity of the enzymes, and describes a system which is switched on from
one 'inactive' state to a second 'active' one by contact with a specific
inducer.
(ii) Excitable membranes. Roughly speaking, a biological excitable
membrane, such as the membrane of a nervous cell, may exist in two
permanent states: one polarized (associated with the maintenance of
10
different ionic charges in the two sides) and one depolarized state
resulting from the former upon passage of a pulse or upon a change in
permeability. Blumenthal, Changeux & Lefever (1970) have shown
recently that this depolarization may be quantitatively interpreted as a
transition arising beyond the point of instability of the polarized state
which lies beyond the thermodynamic branch. This instability is due to
the difference in the ionic concentrations, which play here the role of the
constraint keeping the system in a far from equilibrium state. On the
other hand, experimental observations establish that the transition is
indeed in the form of an all-or-nothing effect both for biological and
artificial membranes.
VI. CONCLUDING REMARKS AND FURTHER DEVELOPMENTS
144
VII.
REFERENCES
146
1049-52.
148
WOLPERT,