Bapu R Thorat
Spectroscopy
its application in Organic Chemistry
Bapu R Thorat
Assit. Professor of Chemistry
Govt. of Maharashtra, I. Y. College, Jogeshwari (E),
Maharashtra 400060
Analyze it
What is to be
present and how
much it can be
present?
What
Analysis by using
instruments
How
Identification
Total
information
Estimation
Characterization
Electromagnetic Spectrum
Matter (Molecules)
Total energy of the molecule = E electronic + E Vibrational + E rotational
The magnitude of these energies are in the following order
Eelect > Evibr > Erot
OH
NH2
H3C
CN
COOH
Cl
O
Above molecule contains s electrons (Single bond), p electrons (Multiple bonds) and nelectrons (Un shared pair of electrons on elements like N, O, S, halogens).
1. The energy required for the excitation of these electrons is in the range of 35-143 K cal.
Summary
Organic Molecule
UV/ Visible
radiation
200-800 nm
35-143 K cal
Electronic excitations
p*
p*
etc
UV / visible spectroscopy
IR radiation
2.5-15 m
2-12 K cal
IR Spectroscopy
Dr. Bapu R Thorat
NMR radiation
Radiofrequency
radiations
Flipping of protons
from a to b spin states.
NMR spectroscopy
U.V. Spectroscopy
Electronic Transitions:
Both inorganic and organic compounds show electronic transitions.
The absorption of radiation by the organic molecule in UV and visible region involves
the transition of the electrons from bonding and or and non-bonding n orbitals into
higher energy anti-bonding orbital * and or *.
s*
Unoccupied levels
p*
Energy
Atomic orbital
Atomic orbital
Occupied levels
p
Molecular orbitals
anti-bonding
orbitals
non-bonding
orbital
bonding
orbitals
E
s*
p*
Energy
n
p
s
s*
alkanes
p*
carbonyls
p*
unsaturated
cmpds.
s*
O, N, S, halogens
p*
carbonyls
214
Homoannular dienes
05
-OR
06
-Cl, -Br
05
-OCOR
00
30
05
10
Basic value
= 214 nm
homoannular = 39 nm
component
= 15 nm
3 x -R
obs
max
= 275 nm
cal
max
= 05 nm
obs
max
= 273 nm
= 235 nm
Basic value
= 214 nm
3 x -R
= 15 nm
= 05 nm
Total
cal
max
= 235 nm
* in nm (ethanol)
215 nm
202 nm
Aldehydes C=C-CHO
210 nm
197 nm
30 nm
Homoannular components
39 nm
Ring residues
nm
nm
nm
nm
10
12
18
18
-OR
35
30
17
31
-OH
35
30
30
50
-SR (thioether)
--
80
--
--
-Cl
15
12
12
12
-Br
25
30
25
25
-OCOR
06
06
06
06
--
95
--
--
05 nm
10 nm
Molecule
IR inactive
Higher change in
dipole moment
Polar
functional
groups
Small change in
dipole moment
Less polar
functional
groups/
symetric groups
Intense band
Low Intense
band
Dr. Bapu R Thorat
Vibrations
Fundamental vibrations
bending vibrations
stretching vibrations
Scissoring
symmetrical stretching
antisymmetrical stretching
Wagging
Rocking
stretching
compression
(N-1) are stretching vibration
O-H stretches
Bend
C=O stretches
Bend
Twisting
In an applied external magnetic field, radio waves interact with atomic nuclei
whose I > 0, 1H, 13C, 19F, 31P, etc.
(I = spin quantum number / angular momentum).
Nuclei (isotopes)
% natural abundance
Nuclear spin
1H
99.98
0.02
0.00
19.6
80.4
98.89
1.11
99.63
0.37
99.76
0.04
0.20
100.00
100.00
3
3/2
0
0
5/2
0
2H
3H
10B
11B
12C
13C
14N
15N
16O
17O
18O
19F
31P
1H,13C,17O,19F
2D,10B,14N
12C, 18O
I = , 3/2, 5/2
I = 1, 2, 3
I=0
MAGNETIC
MAGNETIC
NON-MAGNETIC
A molecular formula
An IR spectrum
or
singlet
1
triplet
2
quartet
3
Three types of protons present having different
Dr. Bapuenvironment
R Thorat
magnetic
3
E
X
A
M
P
L
E
43
44
30
Reconsider the number of rings, double or triple bonds that are possible given
the HDI, and reconcile this data with what the 1H chemical shifts
Some hints:
If you calculate an HDI > 4, you probably have an aromatic ring, and this should
show on the spectrum
If you calculate an HDI of 1 or 2 and see no protons that are part of an alkene
and alkyne suspect rings if no oxygen's are present, carbonyls if (C=O) they are
EWG
R CH2
R CH3
EWG CH3
EWG
R CH2
R CH3
Singlets indicate you have protons on carbons that have no chemically nonequivalent protons on any adjoining atom
EWG CH3
EWG
R CH2
R CH3
Does the HDI match? Have you accounted for all atoms in the formula?
From your constructed molecule, pretend you are trying to verify if that
spectrum matches, and quickly re-do the problem
We concluded we have:
O H
2
H3C C C CH3
2-butanone
C4H8O, HDI = 1
3 proton resonances
2 mutually coupled (split)
2H, m
1H, m
3H, d
1H, q
2
3
2H, m
5
HDI = 9 (10) + 0 + 1 = 5
Br
Aromatic
protons
Coupling partners
No protons in olefinic
and aromatic region
No unsaturation or ring.
double, triple bond, ring, etc
are absent
HO
HDI = 0
3H, t
2H, m
2H, m
1H, bs
2H, t
No protons in olefinic
and aromatic region
bs, 1H
6H
1H
2H
1H
Dr. Bapu R Thorat
2H, d
1H, m
6H, d
1H, bs
HDI = 1
HO
Chemically
equivalent H
3H
1H
Carboxylic
acid H
1H
Aromatic
protons
5H
1H
1H
1H, m
1H, bs
1H, m
1H, t(dd)
5H, m
3H, t(dd)
Chiral centre
HDI = 5
OH
Methylene H shows
geminal coupling
1H
1H
No H attached to saturated
carbon / alphatic alkyl groups
are absent
1H
1H
1H, t, ortho-coupling
HDI = 5
O
N
Example 6: C6H4ClNO2
HDI = 5
B
A
C
Cl
:- 211 ( 1200).
I.R.
M.S. (m/z)
P.M.R. ()
:- 1.3 (d, J=7Hz, 3H), 2.6 (d, J=7Hz, 2H), 3.24 (sextet, J=7Hz, 1H),
7.20 (m, 5H), 10.8 (bs, exchange with D2O, 1H).
10.8 (bs,
exchange with
D2O, 1H)
COOH
H
H
H
H
CH3
1.3 (d, J=7Hz, 3H)
3.24 (sextet, J=7Hz,
1H)
:- 275 nm ( 21000).
I.R.
M.S. (m/z)
P.M.R. ()
:- 1.0 (d, J=7Hz, 6H), 2.0 (m, 1H), 2.38 (s, 3H), 3.95 (d, J=7Hz, 2H),
6.16 (d, J=16Hz, 1H), 7.20 (d, J=8Hz, 2H), 7.41 (d, J=8Hz, 2H),
7.75 (d, J=16Hz, 1H).
J = 16 Hz
J = 7 Hz H
CH3
H
O
H
H
H
J = 8 Hz
CH3
If aromatic carbons,
monosubstituted benzene ring
H
H
H
H
H
Dr. Bapu R Thorat
Deduce the structure of the organic compound having the following analytical and spectral
data.
Analysis: : C, 74.98; H, 6.86.
Gives empirical formula
Mass:
IR:
P.M.R. (): 1.31 (t, J=7.1Hz, 3H), 4.2 (q, J=7.1Hz, 2H),
6.43 (d, J=15.8Hz, 1H), 7.67 (d, J=15.8Hz, 1H),
7.24-7.57 (m, 5H).
C.M.R. (): 14.3, 60.4, 118.4, 128.1, 128.9, 130.2, 134.5, 144.5, 166.8.
Structure
Mass:
H
77
O
103
H
H
131
O
H
H
H
H
Dr. Bapu R Thorat
H
H
The absorption at max 279 nm ( 15) in the UV spectrum of acetone is due to1. *
2. n *
3. *
4. n *
n *
n *
These non-bonding electrons are not tightly held as are pi-electrons; therefore, the
non-bonding electrons excited to anti-bonding orbitals by lower energy.
When the carbonyl group is substituted by an auxochrome as OH, -OR, -X, -NR2,
etc the * orbital energy is raised. Therefore, the n * transition of these
compounds shifted towards shorter wavelength.
Which of the following spectroscopic techniques will be useful to distinguish between MSCN and M-NCS binding modes?
1.
2.
3.
4.
NMR
IR
EPR
Mass
Electromagnetic Spectrum
The order of carbonyl stretching frequency in the IR spectra of ketone, amide and
anhydride is-
Electron donating
inductive
and
resonance effect
Absorption
frequency shifted
towards
lower
frequency value by
large magnitude
Opposite inductive
and
resonance
effect
Change
in
frequency
are
depends on the
nature
and
strength
of
electronic effect
Electron
withdrawing
inductive
and resonance effect
Absorption frequency
was shifted towards
higher frequency side
The double bond character increases by electron withdrawing group and vice-versa
O
X
X=
C=O stret.(cm)
in hexane
Br
-1
1760
-I
OPh
OMe
1750
1735
1714
1697
--
+I
-I & +R
& +M
Dr.-IBapu
R Thorat
Me
NMe 2
1660
-I & +R (strong)
An organic compound (C7H12O2) exhibited the following data in the 1H NMR spectrum 7.10 (1H, dt, J = 16 and 7.2 Hz); 5.90 (1H, dt, J = 16 and 2 Hz);
4.1 (2H, q, J = 7.2 Hz); 2.10 (2H, m); 1.25 (3H, t, J = 7.2 Hz); 0.90 (3H, t, J = 7.2 Hz) ppm
The compound, among the choices given below, isO
O
1.
2.
O
O
3.
4.
Compound
(CH3)4C
(CH3)3N
(CH3)2O
CH3F
0.9
2.1
3.2
4.1
Compound
(CH3)4Si
(CH3)3P
(CH3)2S
CH3Cl
0.0
0.9
2.1
3.0
The NMR spectrum of a compound exhibits a doublet at 1.00 with coupling constant
of 8 Hz recorded on a 100 MHz instrument. The two line positions of the doublet in Hz
will beA) 100 & 108 B) 92 & 100 C) 96 & 104 D) 104 & 112.
Chemical shift in ppm = (chemical shift in Hz).106/(strength of applied magnetic field in Hz).
(delta) scale - (delta) = in Hz.106/radio frequency in Hz.
(tau) scale - (tau) = 10 - .
1.
2.
O
O
O
3.
4.
A
ester
methylmagnesium chloride
Grignard reaction
Alcohol
LAH
Red.
C
Alcohol
B
Alcohol
Acid, ellimination
Dr. Bapu R Thorat
C6H12
Gives one
signal in
PMR.
One set of
protons
C9H12O2
Conclusion
(18+2-12)/2 = 8/2 = 4
Presence of C=C, C=O, epoxide ring, ring, CC, phenyl ring, etc
Dr. Bapu R Thorat
IR cm-1 3100-2900
Stretching
of
=C-H
group of olefinic or
aromatic protons
NMR: ppm 3.4 (6H, s); 5.5 (1H, s); 7.5 (5H, m)
Signal of
monosubstituted
benzene ring
Singlet, highly
deshielded
proton attached
to olefinic carbon
or carbon
attached to
oxygen
singlet , Highly
deshielded
magnetically
equivalent 6H,
2 OCH3
Structure:
3.4 (6H, s)
b H3C
CH3 b
O
Ha
5.5 (1H, s)
Ha
3100-2900 cm -1
Ha
Ha
Ha
7.5 (5H, m)
Mass Spectra: The molecular ion peak is at 152. It gives another peak at 121 is
[M 31] or [M OCH3] indicate presence of OCH3 group.
OMe
OMe
OMe
-e
+
+
O CH3
OMe
m/z = 152
Dr. Bapu
Molecular
ion R Thorat
m/z = 121
C4H5SO2N
Conclusion
(10+2-6)/2 = 6/2
=3
Presence of C=C, C=N, N=O, C=O, epoxide ring, ring, CN, NO2, etc
Dr. Bapu R Thorat
Stretching of
CN
group
(2250 cm-1)
Stretching vibration of
CO- group of acid or
ester or thio-ester
singlet , Highly
deshielded
magnetically
equivalent 3H,
OCH3
-1
H3C
O
O
3.5 (s)
H H
2250 cm
-1
-e
S
CN
.+
O
S
CH3O
m/z = 99
CN
+
S
CH3O
m/z = 59
Dr. Bapu R Thorat
+
CH2
S
CH3O
m/z = 73
C9H10O2
Conclusion
(18+2-10)/2 =
10/2 = 5
Stretching vibration of
CO- group (1720 cm-1)
of ester or deshielded
ketone
Stretching of
Aromatic C=C bonds
(1602, 1581 cm-1)
Skeleton vibration of
C-O-C (1270 cm-1)
O
O
CH3
CH3
O
O
Total number of carbon atom present in the molecule (A) = 58/13 = 4 and hydrogens are
(4 + 6) = 10
O
H3C
CH3
CH3
NaOH
EtOH
O
H3C
O
CH3
CH3
A
2. N2
1. H2
4. CO2
In the broad band decoupled CMR spectrum, the number of signals appearing for the
bicyclooctane A-C, respectively are1. 5, 4 and 8
2. 3, 2 and 5
4. 3, 2 and 8
3. 2, 4 and 5
1. 1 : 1 : 1,
3. 1 : 2 : 1,
2.
4.
3:3:1
3:2:8
In the mass spectrum of the compound given below, during the -cleavage,
the order of preferential loss of groups isMe
Et
OH
C3H7
1.
2.
3.
4.