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Describing Life:
An Impossible Challenge?
An alien spaceship orbiting a planet to make At first, the rover sits motionless, a foreign
observations ejects a special robotic rover object on the bleak landscape. Then, slowly, it
toward the planets surface. Retrorockets fire activates its electronic senses. It rotates its

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to slow the robots speed, and parachutes open twin cameras to scan the horizon. It measures
to help it land gently. Now the robot settles the local weather: temperature, barometric
down on the planets surface, amid rocks and pressure, wind speed, and direction. It uses

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soil. Its mission: to determine whether life special equipment to sniff the air to determine
exists on the planet. its composition. The atmosphere is thin, but it

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Figure E3.1 Technology to explore Mars. (a) In July 1997, the rover Sojourner
landed on Mars. The white airbags that cushioned its landing are seen on either side of
the photo. (b) In 2004, two rovers, Spirit and Opportunity, landed at different places on
Mars and sent data back to scientists on Earth. In both pictures, you can see rocks on the
surface and hills in the background.

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does contain some water vapor, even a little that the rover cannot return to Earth. It
more than observers had expected. This is a will send information about minerals, water,
good sign . . . and the climate found on Mars back to
Finding evidence for the potential of life scientists on Earth. Technology is extending
on Mars has been very exciting, though our hands and eyes.
difficult and inconclusive, so far. Scientists Slowly, the soil sample is deposited in a
continue to design missions that will collect special chamber. A specially designed piece of

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additional evidence. How should scientists equipment adds a mixture of radioactive gases.
involved in the effort look for life? The Some of the smallest forms of life on earth use
landing craft, though technologically very light energy and certain gases in the

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complex, is small. Its designers had to make environment around them to build more
careful decisions about the equipment that it complex molecules that are necessary for them
carries and the activities that it is able to to live. Is there anything in the Martian soil

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accomplish. Should they look for signs that will use these gases as molecular food?
of evolution, of growth and development, Will these radioactively labeled molecules
of reproduction? All are fundamental slowly begin to accumulate in the soil sample,

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characteristics of life, but all probably occur as living things remove them from the air and
too slowly to be detected by a tiny, robotic use them to maintain and build their internal
craft. Instead, designers decided to test structures?

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surface samples for more immediate, more Recognizing life on an alien planet such as
easily recognizable signs of life. They will test Mars is indeed a challenge. At minimum, such
for those signs that have to do with a living an endeavor requires that we start with a good
systems requirement to use matter and energy idea of how to recognize life on Earth. But

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obtained from the environment to maintain even this task is not simple. Living systems
its complex organization. share many characteristics. But do any of these
Suddenly, a mechanical arm extends from actually distinguish living things from

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the strange craft and scoops up some of the nonliving things?
Martian soil. At last, humans have collected a You already have an intuitive sense about
sample from another planet. It doesnt matter life. If you were to ask your classmates to
identify a tree, a dog, and a rock as living or

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nonliving, chances are great that all their
answers would be the same. However, if you
then asked your classmates precisely how

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they know what is living and what is not,
their responses probably would vary. And
suppose you asked them to categorize a less
familiar object, such as the scaly, grayish
green lichen on a boulder (like the one
depicted in Figure E3.2)? This time, some of
your classmates might say that this stuff is
not alive.
How can we describe life so that we
always can identify it when we see it? Perhaps
the easiest way to begin thinking about life is
Figure E3.2 Lichens are organisms that
consist of a close association between a to consider what happens when an organism
fungus and a photosynthetic organism such dies. Think, for example, about a bird that has
as an alga or a blue-green bacterium. just died. The bird can no longer move, or eat,

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Figure E3.3 A proposed evolutionary tree. What evidence do you think scientists
used to develop this explanation?

or keep itself warm. Even if you touch it, it distinguishes it from nonliving substances, you
does not respond. Eventually, the dead body may find it rather difficult. Rather than trying
will become decayed and disorganized. It will to describe life precisely, let us first examine
never recover its form or function, nor will it the characteristics that we generally observe in
ever again produce offspring. living systems. Then, perhaps, we can consider
This simple example provides some clues how we might go about recognizing life, both
to the nature of life by showing that certain on Earth and on another planet.
properties of a living system are lost when All forms of life, even vastly different
death occurs. If, however, you try to write a forms such as humans, apple trees, spiders,
simple description of life that absolutely and microscopic bacteria, share many basic

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characteristics. That should not surprise you. crab, characteristics remain unchanged for
In fact, it is because living things share much long periods of time. More often, however,
in common that you can make some natural selection results in gradual change in
judgments about whether an unknown populations. These changes eventually lead to
object is likely to be alive or not. distinctly different populations of organisms
Understanding these common that display an amazing range of diverse
characteristics is fundamental to characteristics. Figure E3.3 illustrates how

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understanding biology. In fact, these scientists think one type of organism may
characteristics are so important that we have have evolved. Evolution represents the first
summarized them as six unifying principles of unifying principle considered in this course.

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biology, and we have organized the flow Although evolution is important in
of topics in this course around them. You understanding life, living organisms, and their
already have encountered evolution, one of interactions, it is not particularly helpful in

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these principles. As you begin to develop a determining whether a particular object is
deeper understanding of the remaining five living or not.
principles, you will be developing a rich Homeostasis: Maintaining Dynamic

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understanding of how all living systems, Equilibrium in Living Systems. A second
including humans, function. characteristic of lifeand a second unifying
Evolution: Patterns and Products of principle of biologyhas to do with a living

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Change in Living Systems. As you already systems ability to maintain an internal balance,
have seen in this unit, one significant referred to as homeostasis. All organisms
characteristic of living systems is that they regulate their internal systems in response to
evolve, or change, across time. Through changes in their surroundings. When you are

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natural selection, some individuals have startled, your heart beats faster, sending blood
characteristics that make them best suited to through your body at a faster rate. This
their response ensures that your body will continue

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environment. to have a good supply of oxygen and nutrients
These (which are carried in the blood) during a
individuals are possibly stressful or dangerous time. In fact, all
most likely to organisms show a similar type of internal

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grow to regulation. Bacteria adjust their production of
maturity and certain key products in response to changes in
reproduce. the nutrient levels in their environments.

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Those same Plants respond to changes in humidity by
individuals then opening or closing tiny holes in the underside
pass their traits of their leaves. And some animals can change
on to their their coloration in response to their
offspring. As a environment (see Figure E3.4).
result, those Energy, Matter, and Organization:
adaptive Relationships in Living Systems.
characteristics Another common characteristic of life is
become more organization. All living systems are highly
common in the organized forms of matter. This matter is
population. made from atoms held together in ways that
Figure E3.4 This anole lizard can In some form large, complex molecules. Scientists have
change color in response to its species, such as identified more than 100 different types of
environment. the horseshoe atoms. One of the most remarkable

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similarities among all living things, however, instructions that direct an organisms cellular
is that they are made predominantly from only activities and developmental events are
a few types of atoms. These are notably carbon, specific for its species, all organisms, from
nitrogen, oxygen, hydrogen, phosphorous, bacteria to humans, use the same DNA to
and sulfur. communicate those instructions. The ability to
The molecules of living materials are transfer those instructionsthrough DNA
organized into complex structures known as to the next generation during reproduction

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cells. Cells are the basic structural units of represents a fourth important unifying
living matter. Because most cells are too small principle of life, that of continuity.
to see with the unaided eye, scientists did Development: Growth and

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not see cells until 300 years ago, after the Differentiation in Living Systems. The
invention of the microscope. As Figure E3.5 ability to grow and develop represents the fifth
illustrates, cells are baglike structures made unifying characteristic of living systems.

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of a membrane that encloses and protects Growth is an important activity in the early
the contents. life of a human. Growing requires the body to
A related property of all living systems assemble new tissue. As the organisms size

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is that they require energy to build and increases, the way in which the organisms
maintain their highly organized structures and tissue is organized also changes. Human
to carry out all of their activities. Recall that adults not only are larger than children are,

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the bird, once dead, eventually will decay and but they also are shaped differently. And they
disintegrate. It will lose its distinctive shape can do a variety of things that human infants
and appearance and become increasingly cannot do, such as walk and talk. Many
indistinguishable from the matter around it.

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The loss of the birds characteristically high
organization follows the more basic loss of its
ability to obtain matter and energy from its

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environment and to use that matter and
energy to keep its body (its matter) repaired
and functional. Together, the ideas of matter,
energy, and organization represent the third

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unifying principle of biology.
Continuity: Reproduction and
Inheritance in Living Systems. The

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organization and the function of living
systems depend on specific plans that are
encoded in each organisms genetic material,
or DNA. For example, maple trees display a
characteristic structure and function because
they possess DNA characteristic of maple
trees. Humans grow and function in
ways that we recognize as distinct from other Figure E3.5 The cell is the basic unit of living
life-forms because humans possess DNA matter. Most prokaryotic cells (cells without
characteristic of humans. DNA is a long and membrane-enclosed nuclei or organelles) are 110 m
in diameter. Most eukaryotic cells (cells with a
complex molecule that stores information (see
membrane-enclosed nuclei and organelles) are 10100
Figure E3.6). One of the most significant m in diameter, but protoctists can be much larger.
characteristics that unifies living systems is the Notice the organization of the interior of this
universal nature of this DNA. Although the Thecamoeba cell, which is 10 m.

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Figure E3.6
base

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DNA is a complex molecule. It has a double helix (twisted ladder) shape.

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plants, in a similar manner, begin life as small Organisms do not exist in isolation, but rather

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seedlings that push up through the soil and live as one element in a complex community
grow into mature plants that look quite of life (refer to Figure E3.7). Imagine a
different from the early seedlings. Plant wooded area alongside a stream on an early
growth also involves the addition of new summer day. Plants provide shelter and food

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tissue and the organization of new parts such for a variety of birds. Perhaps a rabbit has dug
as leaves and reproductive structures. a burrow nearby and now feeds on wild berries
Ecology: Interaction and growing in the light shade close to the forest.

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Interdependence in Living Systems. Not far away a fox has just left her den in
Finally, all living systems on earth are part of search of food for her young. This community
an interactive and interdependent web of life. of different, yet interdependent, living systems

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illustrates the sixth unifying principle of
biology, the interactive and interdependent
nature of life.
To the extent that these brief descriptions

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capture the essence of each of the unifying
principles, we might say that in this short list
of characteristics, we have described lifeas it
exists on earth. Can we say that any one of

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these principles defines life, in the sense that it
alone is necessary for life and that it alone is
an indicator of life? Probably not. Just as a
combination of characteristics identifies you as
a human, a combination of these principles
indicates the presence of life.
To this day, curiosity about life on Mars
remains high. Unfortunately, although two of
the three tests described in Figure E3.8
yielded some interesting results, scientists
failed to duplicate the results with subsequent
Figure E3.7 Organisms along and in this stream interact and samples. This was disappointing and suggested
depend on each other.

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lightbulb

a b c gas processing
gas detector radiation counter tube

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gases with
radioactive radiation counter
nutrient soil sample nutrient solution with carbon atoms soil sample
solution radioactive carbon atoms soil sample
1. Radioactive gases are introduced into the chamber

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1. Soil sample is suspended in a porous cup. 1. Soil sample is sprayed with radioactively containing the soil.
2. Nutrient solution is added to the soil sample. labeled nutrient solution. 2. The light is turned on as a source of energy.
3. Changes in gas content are measured by a 2. Any radioactive carbon dioxide that is produced 3. The chamber is heated to release newly made
gas detector. by the soil and released into the air above the substances into the air.
sample is detected and counted. 4. The air is processed to separate complex substances
from the simple gases that had been introduced earlier.

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5. Any radioactive carbon that is contained in these
complex molecules is detected and counted.

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Figure E3.8 Three experiments to test Martian soil. (a) A gas exchange experiment tested the Martian
soil for evidence of organisms that took in gases from the Martian atmosphere and nutrients from the soil and
gave off gases as wastes. This experiment is then performed using earths soil. The experiment indicates the
presence of microscopic organisms that take in oxygen and nutrients and give off carbon dioxide. (b) Scientists

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next search for the release of carbon dioxide. The experiment tests the Martian soil for evidence of organisms
that could use simple nutrients and give off waste gases (CO2). This experiment was similar to the gas exchange
experiment. It served as an important check on its results. Again, this experiment gives strong, positive results
when earths soil is tested. (c) A third experiment tested the Martian soil for evidence of organisms that might

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build large, complex substances out of simple gases in the Martian atmosphere. This experiment is then
performed on earths soil. The experiment indicates the presence of microscopic organisms that use the energy
of sunlight to help them build sugars and other large, complex molecules.

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caution in interpreting even the changes that not find life. But they did find evidence
the distant instruments did detect. In fact, by indicating that water, a necessity for life as we
1979, most scientists involved with the project know it, existed on Mars in the past.
had agreed that although they could not rule Describing life . . . a difficult, but not an

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out the possibility that life exists on Mars, all impossible challenge. Looking for life, using
the data that they collected in the original earths criteria, in a very different environment
experiments could be explained as resulting more than 40 million miles away . . . more

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from purely chemical (not biological) causes. difficult to be sure, but impossible?
The rovers that landed on Mars in 2004 did What do you think?

Five Kingdoms
In which of these pairs of illustrations are closely related than are the two single-celled
the organisms most closely related? Figure E3.9 organisms. The animals are an African
shows two animals that bear little resemblance elephant and a close relative, a small mammal
to each other. In contrast, Figure E3.10 shows known as a hyrax. What you cannot see in
two types of cells, each an individual organism Figure E3.9 is all of the ways in which these
and each looking quite like the other. organisms are similar, from the basic
Surprisingly, from an evolutionary point structures of their cells to the structures of
of view, the two animals are much more their feet and teeth.

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a b

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Figure E3.9 (a) African elephant
(Loxodonta africana). The average male
African elephant is 350 cm high and weighs
5,000 kg. (b) Rock hyrax (Procavia

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capensis). A rock hyrax may be 30 cm high
and weigh 4 kg.

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On the other hand, the organisms in a very simple type of cell known as a
Figure E3.10 are very distant in their prokaryote. It has no nucleus, and the genetic
evolutionary connection, despite the fact that material that it contains is a huge molecule of
each is a single cell. If you look closely, you DNA, without any fancy packaging. In great

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can find one of the characteristics that marks contrast, the Peranema is a more complex type
these two organisms as being very different. of cell called a eukaryote. Eukaryotes have
Notice that Peranema has an interior cells with nuclei and DNA that is packaged

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compartment that is missing in the other cell. with proteins to form structures known as
That compartment is a nucleus, a membrane- chromosomes. Eukaryotic cells also may have
enclosed structure in the cell that houses its other specialized, membrane-enclosed

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DNA. The second cell is a bacterium called compartments that perform a variety of
Escherichia coli. Like other types of bacteria, its functions, such as energy transformation and
DNA is not separated from the rest of the cell protein storage and packaging. Although
contents by a surrounding membrane. It lacks many similar processes go on in prokaryotic

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a nucleus. cells, these cells do not contain such
These two cells illustrate the single largest compartments.
dividing point that biologists recognize among The structural differences and the

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all of the species on earth. The bacterial cell is evolutionary distance between prokaryotes

a b

Figure E3.10 (a) This Peranema is about 40 m. (b) This


Escherichia coli is 3.5 m in length (photographed at 35,000).

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and eukaryotes are so great that biologists was content with this simple subdivision. We
categorize all organisms on earth on the basis generally have little reason to question it,
of this distinction. Figure E3.11 illustrates the because we rarely encounter living systems
five major types of organisms recognized by that are so different in external appearance
most biologists today. Note that one of the that they dont seem to fit.
kingdoms includes all of the prokaryotic By the middle of the 19th century,
organisms. In contrast, the organisms in each however, some scientists had started to

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of the other four kingdoms are eukaryotes. question whether organisms such as fungi and
It would not be surprising if the bacteria really fit well into either the plant
classification scheme shown in the figure and kingdom or the animal kingdom. Despite

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used in this course seems a bit foreign to you. these questions, suggestions to increase the
After all, most of us grow up thinking that the number of kingdoms were largely ignored. It
world contains only two basic categories of was not until the 1960s that the prevailing

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organisms, plants and animals. attitude in the scientific community began to
We are not alone in this. From the days of change. Scientists were discovering new forms
Aristotle to the mid-1800s, almost everyone of life and were using new microscopic and

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Plantae Animalia

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Craniata
Anthophyta (vertebrates)
(flowering plants) Fungi
Mollusca
(molluscs)
Filicinophyta
(ferns) Hermichordata Annelida
Coniferophyta
(acorn worms) (segmented

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(conifers)
Sphenophyta Basidiomycota worms)
(horsetails) (club fungi)
Ginkgophyta Crustacea
(ginkgo) Echinodermata
Ascomycota (crustaceans) Mandibulata
(sea stars)
Bryophyta (sac fungi) (insects)
Cycadophyta (mosses)

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(cycads) Rotifera
Chelicerata
(rotifers)
Hepatophyta (spiders)
Zygomycota Cnidaria
Lycophyta (liverworts) (conjugating fungi) (jellies) Platyhelminthes
(club mosses)
(flatworms)
Anthocerophyta Porifera
(hornworts) (sponges)

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Rhodophyta Actinopoda
Chlorophyta (multicellular (heliozoans)
(uni and multicellular red algae) Apicomplexa
green algae) (sporozoans)

Oomycota Discomitochondria Ciliophora


(flagellates)

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Protoctista (water molds) (ciliates)
(Protista) Phaeophyta Diatoms Myxomycota
(multicellular Dinomastigota
(slime molds)
brown algae) (dinoflagllates)
Rhizopoda Eukarya
(sarcodines) (Eukaryotes)
Prokarya
Gram-negative Bacteria (Prokaryotes)
green purple methanogens
Cyanobacteria nonsulfur bacteria
bacteria halophiles
Bacteria Gram-positive
Bacteria Wall-less
(Monera, Bacteria
Actinobacteria Endospora
Prokaryotae)
thermoacidophiles
Deinococci
mycoplasmas

Eubacteria Archaea

Figure E3.11 A five-kingdom scheme. The Bacteria kingdom includes the


organisms that do not have membrane-bound organelles. Plants, animals, fungi,
and protoctists are all eukaryotes. What differences do you think separate the
organisms in each kingdom?

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biochemical techniques to examine cell patterns in the criteria that determine each
structure and function in even well-known group. Look as well for differences that
organisms. This led to an increasing amount distinguish one basic type of organism from
of evidence that supported proposals to the next. Do you see some of the reasons that
increase the number of basic categories that biologists can no longer accept a two-
biologists recognize. Figure E3.12 illustrates kingdom view?
some of these multikingdom schemes. These Kingdom Bacteria (Prokaryotae,

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ideas will help you trace the changes that have Monera). The main criterion (or
occurred in scientists thinking to bring us to qualification) for membership in this
the five-kingdom system that is most often kingdom is the presence of the prokaryotic

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used today. type of cell (a cell that lacks membrane-
As you read the following brief enclosed compartments). The Bacteria
descriptions of the five kingdoms, look for kingdom includes the bacteria (or eubacteria)

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Plantae Animalia

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Figure E3.12 Scientific ideas change
vascular plants
chordates across time. (a) The first attempts to
arthropods categorize life resulted in this two-
mosses and
kingdom division between plants and

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liverworts segmented animals. (b) This model shows three
worms
echinoderms kingdoms: plants, animals, and protists.
algae
mollusks (c) Scientists developed this four-kingdom
fungi coelenterates scheme when they realized the great
flat worms

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differences between eukaryotes and
sponges
slime
prokaryotes.
flagellates
molds
sporozoans
Animalia

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bacteria sarcodines
?

rms
ciliates
a Plantae

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vascular plants

lusk
blue-green algae

d wo

s
od
mol

p
ente

hro

ino ates

s
art

rm
segm

d
mosses and

or

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ch
liverworts fungi

ch
flat

s e
b worms

ate
Animalia
sp nter
s
ge
Plantae
ele
algae on
co

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s
worm

s
lusk

lla s

vascular plants
ge an
tes
d s

fla rozo
po
mol
d

slime
ente

hro

o
hin ates

sp

molds
s
art

s
ine
segm

rd

er

cod
o

od

mosses and
sar
ch

fungi Protista
liverworts
s s ec

flat ciliates
worms
ge te
on era

ba
sp lent

blue-green algae cte


ria
e
co
zoans

algae
slime
tes
sporo

molds
lla
ge
fla

e s
din Protista
rco
sa iates
cil

ba
c blue-green cte
bacteria ria
Monera

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and the archaea. Bacteria usually are single some also exchange small amounts of
cells, but they may occur in groups of cells. DNAa form of sexual reproduction.
Bacteria come in a variety of shapes, as Kingdom Animalia. Among the four
depicted in figure E3.13. Some swim by eukaryotic kingdoms is the kingdom in which
means of long, whiplike tails. Bacteria live in humans are found, the kingdom Animalia.
almost every environment, from the soil to Animals are multicellularthey have a
inside the human mouth. Archaea often live complex organization of many specialized

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in extreme environmental conditions. Some cells. Animals also are characterized by their
live at high temperatures or in highly acidic ability to bring food into their bodies and
conditions; others live in high-salt conditions. digest it. In addition, most animals reproduce

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Some archaea live in environments where sexually and have senses and nervous systems
there is very little oxygen, and they produce that enhance their ability to move.
methane gas. Animals live in marine and freshwater

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Bacteria show a great diversity in the environments, inhabit the soil, or live on land.
processes that they use to obtain energy. In addition, animals come in a range of sizes,
Many bacteria can use the suns energy from microscopic worms that live in human

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directly to power the reactions required for blood to whales that can reach lengths of
making their own food through 27 meters (89 feet). Figure E3.14 shows a
photosynthesis. Others use energy derived diversity of animals.

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from the matter (food molecules) that they Kingdom Plantae. Another eukaryotic
acquire from their environments. As a group, kingdom, the kingdom Plantae, includes
bacteria can digest almost anythingeven organisms that acquire their energy not from
petroleum. This ability is fortunate for us. eating, but from the sun. Plants carry out

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Bacteria that can recycle matter through photosynthesis, a process by which cells use
decomposition increasingly are being used to energy from sunlight to produce their own
help with environmental cleanup efforts. All food. Photosynthesis takes place in

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bacteria reproduce by dividing into two. But membrane-enclosed structures within plant

a c

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b D Figure E3.13 Examples of
prokaryotes. (a) These Streptococcus
bacteria (photographed at 40,000) can
cause strep throat. (b) Nostoc
(photographed at 400), a cyanobacterium,
is common in freshwater lakes. (c) Spirella
voluntans (photographed at 400) is part
of a group of bacteria named for its
characteristic spiral shape.

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a b c

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Figure E3.14 Examples of animals. (a) Tube sponges from the Red Sea (b) A click beetle in
Arizona (c) A male hooded oriole from the southwestern region of the United States

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cells called chloroplasts. Chloroplasts contain grow directly from reproductive cells called
chlorophyll, the light-absorbing pigment that spores. Fungi, like plants, have cell walls, but
gives plants their characteristic green color. they do not carry out photosynthesis. You
Plants are multicellular, and their cell probably are more familiar with the members

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membranes are surrounded by a rigid cell of this kingdom than you realize. Fungi such
wall that provides support. Most of them as mushrooms become large, multicellular
reproduce sexually. Plant forms are diverse organisms, with tissues made of slender tubes

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and include mosses, liverworts, club mosses, of cells (hyphae) that may contain more than
ferns, conifers, and flowering plants, as one nucleus. Other fungi, such as yeasts, live
shown in Figure E3.15. The bulk of the as single cells during their entire life cycle.

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worlds food and much of its oxygen are Still others, such as molds and rusts, live as
produced by plants. tiny multicellular structures on the surface of
Kingdom Fungi. Kingdom Fungi, also a bread that has been sitting around too long or
eukaryotic kingdom, includes organisms that lettuce that is going bad.

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a b c

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Figure E3.15 Examples of plants. (a) This moss, Lycopodium, grows in moist areas.
(b) A sword fern, Polystichum munitium, in Olympic National Park, Washington (c) An apple tree,
Malus spp., in full bloom

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Fungi do not digest food inside their important role as decomposers in many
bodies as humans do. Instead, they release communities of organisms. The diversity
molecules called enzymes into their of fungi includes yeasts, molds, morels,
surroundings. These enzymes break down mushrooms, shelf fungi, puffballs, and
(digest) biological material that other living plant diseases such as rusts and smuts (see
systems have produced. The smaller food Figure E3.16). Some fungi also interact
molecules then are absorbed into the cells. closely with green algae or cyanobacteria

Y
Thus fungi, along with many bacteria, play an to form the organisms known as lichens.

a a

P
CO
b b

T
O
N
c

O c

D
Figure E3.16 Examples of fungi. Figure E3.17 Examples of
(a) The mycelium of a wood-rotting protoctists. (a) Trichonympha
fungus, Stereum complicatum (photographed at 135), a protoctist that
(b) A mushroom fungus, Mycema lejiana lives in the gut of termites (b) Micrasteria
(c) Microstoma floccosa, a small, (photographed at 100), a type of green
cup-shaped fungus algae (c) Fuligo septica, a slime mold

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Kingdom Protoctista
(Protista). Finally, the
kingdom Protoctista is a grab
bag of all the remaining
eukaryotes that do not belong
to the animal, plant, or fungi
kingdoms. Protoctists live in

Y
water and in moist habitats,
such as in the soil, on trees,
and in the bodies of other

P
organisms.
Protoctists show a
remarkable range of diversity

O
in their methods of obtaining Figure E3.18 Minerva Terrace, Mammoth Hot
food, their methods of Springs, Yellowstone National Park. Archaea live in
reproduction, their life cycles, environments like these hot springs.

C
and their lifestyles. Most
protoctists are microscopic
more about the organisms that inhabit the
single cells and many grow as colonies
earth. For example, evidence obtained during

T
clusters of individual cells. Others, such as
the last two decades suggests that the archaea,
brown algae living in the ocean, may form
which are currently in the kingdom Bacteria,
multicellular structures up to 100 meters
differ from other bacteria in that kingdom.
(328 feet) long. Some protoctists are brightly

O
The archaea include organisms that live in
colored algae that produce their food through
environments similar to those that probably
photosynthesis. Others are slime molds that
existed early in earths history, such as hot
obtain their food by decomposing the dead

N
springs (like those in Figure E3.18), sulfur-
tissues of other organisms. Still other
containing muds at the bottom of ponds,
protoctists are parasites of animals, plants, or
salt ponds, and salt lakes. For that reason,
fungi. A single droplet of pond water viewed
biologists think that the archaea are among
under the microscope reveals a world of

O
the very oldest organisms on earth. Because of
protoctists in their myriad of shapes. Figure
their age and their differences from other
E3.17 depicts several protoctists.
bacteria, they perhaps merit a kingdom of
Scientists may rethink the classification
their own.

D
system once again as they continue to learn

From Cell to Seed


Have you thanked a green plant today? Plants organism likely was the ancestor of all
play a critical role in our existence on earth. modern plants.
They produce the oxygen that we breathe, the To understand how that could be, we need
food that we eat, and the multitude of to trace the history of plant evolution. One of
materials that we use, from rubber, to lumber, the ways we can begin to understand this
to medicines, to coffee. Perhaps we ought to history is to recognize that each of
ask, Have you thanked a 3.5 billion-year-old the major events of plant evolution that
single-celled organism today? Such an scientists think took place involved the

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appearance of a major adaptation. These

ag f
ars s o
o
events led to the emergence of the hundreds

ye llion
of thousands of different species of plants that

Mi
a
Er
currently inhabit every imaginable place on
earth, from the frozen Arctic tundra to lush
Apelike ancestors of

Cenozoic

7
tropical rain forests. humans appear
The ancient seas. We begin our survey
Primates appear

55
Y
at a point about 3.5 billion years ago (see the
timeline in Figure E3.19). Evidence indicates
Dinosaurs become

66
that plants, like all other modern species,

P
extinct

Mesozoic
evolved from single-celled organisms that first

130
lived in ancient seas and resembled modern Flowering plants appear
prokaryotes. The atmosphere above these seas

210
O
Mammals appear
is thought to have consisted of a mixture of
gases, largely water vapor, carbon dioxide and

360
Amphibians appear
Paleozoic
carbon monoxide, nitrogen, hydrogen sulfide

C
(the stuff that makes rotten eggs smell), and
430
Land plants appear
hydrogen. Because this mixture of gases
500
probably contained little or no oxygen, First vertebrates
appear (jawless fishes)

T
animals and plants, as we know them today,
4100 3500 2400 2100

could not have survived.


The first single-celled organisms that Multicellular organisms
(algae)
Precambrian

lived in these seas most probably used

O
Free oxygen building up
complex molecules in their environment as in the atmosphere
their source of energy. These molecules likely Prokaryotes (bacteria)
were formed as a result of chemical reactions

N
that occurred among the various substances Oldest earth rocks
present in the seawater. At some point,
4600

Origin of earth
however, the growing population of living cells
probably started using these complex

O
Figure E3.19 Timeline of
molecules faster than they were being
major evolutionary events.
formed. Scientists think that as these Why do you think each of these
primitive food molecules became scarce, events is significant?

D
the limitation of resources favored the
survival of occasional cells that were able to
use sulfur compounds, carbon dioxide, and
the energy in sunlight to build their own same apparatus, such as those in
complex molecules. These cells possessed a Figure E3.20, still exist.) Even sulfur
chemical apparatus that was capable of compounds, however, were not available
building complex molecules from simple in unlimited supply. A substance that was
sources. Thus, they were largely independent abundant was water. The appearance of cells
of the dwindling supply of complex molecules that could use water instead of sulfur
that still floated free in the ancient seas. compounds to build complex molecules was a
The appearance of oxygen in the major evolutionary advance. This type of
atmosphere. Scientists think that it was photosynthesis (a process in which water,
these first self-sufficient organisms that gave carbon dioxide, and light energy are used to
rise to modern plants. (Bacteria that use this build complex molecules) releases oxygen

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photosynthetic cells, such as the blue-


green bacteria shown in Figure E3.21
and including those found in plants,
contain a green pigment called
chlorophyll that absorbs energy from
sunlight.
By about 2.1 billion years ago,

Y
significant amounts of oxygen had
collected in the atmosphere of the
earth and formed a layer of ozone.

P
(Ozone molecules are composed of
three atoms of oxygen.) The ozone
layer blocked out some of the

O
dangerous ultraviolet light from the
sun. Because ultraviolet light damages
DNA, the establishment of an ozone

C
Figure E3.20 Modern phototrophic bacteria, Chromatium layer made it possible for organisms to
okenii, though only 15 m long, are able to build complex survive on land (water blocks
molecules. The globules you see are sulfur particles. ultraviolet light quite well).

T
The appearance of eukaryotic
cells. The fossil record indicates that
just about this time, another key
evolutionary event occurred. By about

O
2.1 billion years ago, more complex
cellsancestral eukaryoteshad
appeared in the fossil record. There

N
is evidence that some of these
early eukaryotes incorporated
photosynthetic bacteria within their
cells. As a result, they were able to

O
carry out photosynthesis.
The appearance of
multicellular organisms. At this

D
point in evolutionary history, some of
these eukaryotic organisms consisted of
groups of cells rather than a single cell.
A multicellular organism would have
Figure E3.21 Photosynthetic bacteria. Bacteria such as had a better chance of surviving on
these Gomphosphaeria, which are each 1 m in diameter, land than would a one-celled
contributed to the production of oxygen in the earths early
organism. The outer layer of cells
atmosphere.
might have protected the inner cells
gas. This gas was a substance that probably from drying out rapidly. The inner cells
had not been present in the atmosphere of might have been efficient at photosynthesis.
the primitive earth. Today, photosynthesis is Other cells of the same organism might have
the major method of supplying energy either become specialized in collecting water or
directly to living systems or indirectly to nutrients from the environment. The
organisms that prey on others. Modern specialized functions of different cells in one

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organism would have enabled the organism


to exploit more of the resources in its new
environment. The first plant may have been
a specialized, multicellular organism,
somewhat like the modern alga Chara in
Figure E3.22. This first plant was able to
live and reproduce on land if ocean spray or

Y
tides kept it moist.
Two plant groups apparently evolved

P
from such relatively complex multicellular
green algae. One group is represented today
by mosses (refer to Figure E3.15a) and
related plants. These organisms possess few

O
adaptations to life on land and require a
moist environment in order to live and
reproduce. The other group, which includes

C
fossils of the oldest land plants, has many
adaptations to life on land.
Adaptations that enhanced

T
survival on land. One adaptation to life on
land was the development of a waxy material
that reduced water loss by providing a

O
protective covering over the outer plant cells.
The development of vascular tissue was
Figure E3.22 Chara. Chara is a modern
another important adaptation. This multicellular alga. The orange and yellow
plumbing system carries water from the

N
globules are reproductive structures.
ground up through all the parts of the plant.
Vascular tissue, depicted in Figure E3.23,

O
D
Figure E3.23 This magnified cross section of a young maple tree stem
(photographed at 7) shows the vascular tissues as rings around the outside.

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a b

P Y
O
Figure E3.24 How are these seeds likely to be dispersed? (a) The female cone in this
pion pine will mature and have seeds on the inside of the scales. (b) A cantaloupe has
seeds inside the fleshy fruit.

C
enables plants to grow to large sizes. The oldest begins to grow. This system allows wide
common ancestor of modern vascular plants dispersal of new organisms because the seeds

T
developed about 420 million years ago. are spread by various means (wind, animals,
The earliest vascular plants, however, were water) and begin to grow in new locations.
limited by their means of sexual reproduction, In cone-bearing plants such as pines and
which required them to live in a moist firs (refer to Figure E3.24a), seeds are

O
environment. In early land plants (and their dispersed from open structures. But in
present-day descendants), sperm cells could flowering plants, seeds develop inside a
reach egg cells only if the plant was covered specialized structure that becomes the fruit of

N
with a film of moisture in which the sperm the plant (see Figure E3.24b). The flowering
could swim. As a consequence, these plants plants, products of millions of years of
were more successful in environments that evolution, are the most successful type of
contained at least a moderate amount of living plants. They are represented by more

O
moisture. than 250,000 species and have adapted to
Eventually, however, new species evolved every habitat on earth except Antarctica. If
that carried out sexual reproduction you doubt their value and importance to us,

D
internally, within specialized reproductive try these simple tests:
structures that eliminated the need for Ask a friend or a member of your
external moisture. These changes probably family to name five types of plants
occurred about 400 million years ago and quickly.
enabled these new species to inhabit drier
areas. In the most advanced modern vascular Ask the same person to quickly name
plants, the reproductive structures are located five important commercial products that
in cones or flowers. come from plants.
Another adaptation that evolved about Chances are that most, if not all, of the
350 million years ago was the production of five plants or products that they name are, or
seeds. Seeds are products of sexual come from, flowering plants. These are some
reproduction. They contain an inactive, tiny of the modern-day descendants of simple,
plant embryo packaged in material that single-celled ancestors that lived in primitive
provides food when the seed germinates and seas about 3.5 billion years ago.

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Mutations Are a Source of Variation


Think about all of the organisms that you Characteristics that are likely to be most
have observed. Despite their common widely represented in later generations are

Y
ancestry and despite the common properties those of individuals that have the best ability
that they share as living systems, they really to reproduce. Most of these characteristics

P
are quite different from one another. Even likely have served as adaptations for that
similar types of organismsfor example, the population for some time. On the other
plants that you examined in the activity hand, new characteristics that may have
Adaptation, Diversity, and Evolutionhave appeared that decrease an organisms chance

O
quite different characteristics. How can we for survival at this time and in this
explain the wide range of characteristics environment are not likely to be passed on to
among the organisms on earth? offspring because the organism often dies

C
The key to that question is natural before it reaches reproductive maturity.
selection, the process by which evolutionary Does this mean that the population never
change occurs. You examined natural selection will change? Not at all. First, it is possible that

T
in the Chapter 2 activity Modeling Natural a new variation might randomly occur that
Selection. To understand the link between would increase an organisms ability to survive
natural selection and diversity, consider briefly and to reproduce. In this case, natural

O
the sequence of events that might happen to a selection would tend to perpetuate that new
population of organisms living in a particular adaptation and the population might slowly
environment. A population is all of the begin to change. Second, it also is possible
organisms of one species living together in one that the environment might change and

N
area at the same time. As members of the same that characteristics that were not adaptive
species, these organisms share certain in the earlier environment suddenly become
characteristics. Nevertheless, within any beneficial. Remember as well, that
population there also is some variability in characteristics that represent adaptations at

O
characteristics (just look around you in your one point in the history of a species may
classroom). This variability results from the cease to do so as the environment changes.
normal events of sexual reproduction as well as Adaptations relate to specific environments. If

D
from random changes (mutations) that occur in the environment changes, then a characteristic
an organisms DNA during reproduction. that had been an adaptation may no longer
What happens to this population if the provide an advantage. Unless such a
environment does not change? Does this characteristic is harmful in the changed
variability increase? On the other hand, do the environment, it may not immediately
members of the population continue to look disappear from the species because it will
very much like each other and like past not be selected against. Gradually, the
generations? characteristic may become less prominent
Most likely, future generations of that among individuals of the population in later
population will continue to look very much generations because it no longer is
the same. This continuity in adaptive advantageous.
characteristics from one generation to the The correlation between surroundings
next occurs because of natural selection. and adaptations is an explanation for the

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shade or burrow into the sand to escape the


drying heat. Life in a hot, dry climate
challenges an organisms ability to maintain
the bodys balance of water, salts, and
temperature. Many adaptive characteristics
have arisen that respond to these
environmental conditions.

Y
As organisms compete for food and
protection in a living environment, the
characteristics that enable them to survive

P
depend on the current physical conditions,
such as amount of rainfall, temperature, and
availability of light. They also depend on the

O
presence of, and interaction with, other
species. For example, a nighthawk has the
beak structure, the eyesight, and the

C
capability of maneuvering quickly in flight
that enable it to catch flying insects. The
nighthawk is in a good situation to compete

T
for food, as long as there are flying insects to
be had. In an unusually dry season, insects
may not reproduce in large numbers, and the
adaptive characteristics of the nighthawk

O
would be less useful. If this climatic change
Figure E3.25 Manatee. persisted for many seasons, it would have
long-lasting effects. The nighthawk

N
population would decline.
rolling grasslands, and rocky coastlines. Each Sometimes characteristics such as those
of these environments contains a variety of of the nighthawk can be adaptive and yet
species, some unique to that environment. somewhat misleading in terms of an

O
Each species has its own distinctive way evolutionary pattern. Insect-eating bats, for
of surviving and reproducing, which is example, have some of the same characteristics
somewhat dependent on its adaptations as the nighthawk. They are well adapted for

D
(see Figure E3.25). The enormous diversity quick turns in flight and have a way to sense
of species in the five kingdoms is in part a prey at night. (They rely mainly on sound-
result of the range of adaptations to the based sensory perception.) Both species have
enormous variety of environments. adapted to compete for the same food source
The adaptations that exist in an extreme at the same time of night. Yet the nighthawk
environment, such as the desert, clearly show is a bird and the bat is a mammal. To trace the
the relationship between adaptations and true relatedness of these two species, we must
surroundings. Many desert plants have consider a combination of traits rather than
structures such as spines instead of leaves just one or two.
(see Figure E3.26). In addition, some are Through the long years of evolutionary
coated with a thick, waxy outer layer that history, new species have arisen as new
reduces water loss. Most of the mammals are adaptive traits appeared within some
inactive during the day and often hide in the subgroup of a population. These adaptations

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must appear at a level sufficient to make this differences appear between the new and old
group distinct. Thus, a new species at first is species. Thus, classification criteria, which
related very closely to the remaining reflect the pattern of evolutionary change,
members of the species from which it was often are characteristics that are, or once
derived. As more time passes, generally more were, adaptations.

P Y
CO
T
O
Figure E3.26 Desert adaptations. The horned lizard

N
(Phryhosoma cornutum) and the cactus (Opuntia spp.) show
several adaptations to the desert environment. How many do
you see?

O
Organizing Diversity

D
Whenever people collect information, they they accumulate about different types of living
develop systems for organizing it. Think of systems. One important way to categorize this
the ways people organize the following: notes information is by how long ago certain
for research papers, computer files, recipes, or organisms shared a common ancestor. Thus,
CD collections. Scientists organize biologists have developed classification
information in specific ways for specific schemes that reflect our understanding of the
purposes. Health care professionals, for evolutionary relationships that exist among
instance, organize information about blood the millions of different known species.
types in a way that differs from how geologists One of the criteria that biologists use
organize information about soil types. to construct these schemes is structural
Biologists, likewise, have developed their own similarities among organisms. A pattern of
systems for organizing the information that similar characteristics or homologies

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re-enactments, films depicted dinosaurs by


superimposing close-up images of lizards
against a backdrop that suggested enormous
size. These images were not very convincing
to those who had visited a museum and seen
fossilized skeletons of the extinct giants or
reconstructions of them based on scientific

Y
data. Nevertheless, most people probably
reacted more favorably to images of fearsome
reptiles (dinosaurs) than they would have

P
reacted to close-ups of fearsome songbirds.
Yet, birds also are fairly close relatives of the
dinosaurs. They are perhaps even closer than

O
modern reptiles, despite the fact that birds
look less like their prehistoric dinosaur
ancestors.

C
Another type of evidence that biologists
Figure E3.27 Giant panda (Ailuropoda use to establish evolutionary relatedness and
melanoleuca). The giant panda is closely related
to bears.
to organize meaningful classification

T
schemes comes from biochemical
examination of the proteins or DNA found
(refer back to the essay Modern Life: Evidence in each organism. Biochemical homologies
for Evolutionary Change on page 107) may have become increasingly important in

O
suggest evolutionary relatedness. Appearances determining relationships. Sometimes
alone, however, can be misleading when it comparisons of DNA sequences have
comes to recognizing biological relatedness. changed our understanding of the

N
For example, not all traits are significant when relationship between organisms. The greater
considering questions of relatedness. Some the similarities in DNA sequences, the more
characteristics are acquired during an closely related two organisms are thought to
organisms lifetime, such as bigger muscles be. (Refer to Figure E2.7, Comparing DNA

O
built up by weightlifting. Because these across primates, on page 109.)
characteristics cannot be inherited, they Biochemical techniques have helped to
cannot be used as clues to evolutionary clarify some classification problems. For

D
relationships. The characteristics that example, for many years experts could not agree
represent biological relatedness are those that on the classification of the giant panda
are heritable. These characteristics can be (see Figure E3.27). Some experts grouped
passed on from parents to offspring by way of pandas with bears; others grouped them with
DNA. True homologies always involve raccoons. New techniques for studying the
heritable characteristics. homologies in DNA have led to a greater
Similarly, not all organisms that look understanding of the evolutionary relationships
different are necessarily unrelated. Think back between bears, raccoons, and pandas. Now, the
to the elephant and the hyrax that you saw in giant panda is classified with the bears. The
the essay Five Kingdoms (page 127). Consider evidence suggests that the raccoon and bear
organisms that were commonplace some families diverged from a common ancestor
150 million years agothe dinosaurs. Long between 35 and 40 million years ago.
before computers and other special effects As new information about organisms
provided the technology for creative movie becomes available, scientists may alter their

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opinions about how they should group degree by certain other primates. Decisions
species to reflect these evolutionary about which organisms are the same species
relationships. Although evolutionary history and which organisms constitute a different
does not change, the classification schemes species are not always easy to make. For some
that scientists use to reflect that history organisms that reproduce sexually, clues to
improve with new knowledge and may where species boundaries occur can be gained
change a great deal. from determining whether or not two

Y
Biological classification schemes. organisms can, and do, interbreed to produce
Modern biological classification schemes offspring that also will be able to reproduce.
generally contain a number of categories. Production of fertile offspring is important if

P
Each category represents a group of organisms species characteristics are to be passed on to
with a particular degree, or level, of future generations (refer to Figure E3.29).
relatedness to each other. Organisms that have The criterion of interbreeding is not strict

O
the greatest number of shared characteristics because many organisms that reproduce
are grouped together in the category of sexually do not, however, interbreed in natural
species. You are a member of the species conditions. For example, many plants,

C
known as Homo sapiens, which is Latin for including dandelions and peas, reproduce
knowing man. The first word, Homo, is the sexually by self-fertilization. Other plants,
name of a group of species that share many such as strawberries, reproduce mainly by

T
homologies and as such form a larger means of shoots or roots that grow into new
category, known as a genus. The second plants, as shown in Figure E3.30a. Many
name, sapiens, is the descriptive specific name organisms, such as bacteria and other
within the genus group. microbes, rarely or never reproduce sexually.

O
Although common names for a species Instead, they divide into two cells or a new cell
may vary in different regions or different buds off (depicted in Figures E3.30b and
countries, scientific names do not vary. The E3.30c). In these cases, biologists must rely on

N
use of scientific names is very important to shared characteristics to define the boundaries
accurate communication and efficient between species.
research. For instance, in California a gopher Humans are one species among 1.7
is a small, burrowing rodent with the scientific million that biologists have described so far.

O
name Thomomys bottae (Figure E3.28a). But scientists estimate that the earths total
Whereas in Florida a gopher is a type of number of species may be 30 to 40 million.
tortoise whose scientific name is Gopherus How can such a huge number of species be

D
polyphemus (Figure E3.28b). Imagine how organized according to their evolutionary
difficult it would be for people who used the relationships? Recall that biologists define
same common name for different organisms different levels of relatedness. A species
to communicate without confusion. Using represents the closest level of relatedness in
scientific names avoids that problem.
As important as the concept of a species
is, the category itself is sometimes hard to a b
define. As a human, you share the physical
characteristics of bipedalism, a precisely
opposable thumb, and a relatively large,
complex brain with other organisms in your
species. Recall from Chapter 1, however, that Figure E3.28 (a) Thomomys bottae, a burrowing
these characteristics also are shared to some animal called a gopher in California (b) Gopherus
polyphemus, a tortoise called a gopher in Florida

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parents

P Y
O
horse donkey

C
T
infertile offspring

mule

O
N
Figure E3.29 Defining species. Mating between a horse and a donkey
results in a mule, which usually is infertile. The donkey and horse are considered
to be separate species. All animals are shown about 1/45 of their actual size.

O
biological classification schemes. That is, Diversity shows the relationships of several
members of the same species are considered organisms from the species level to the
to be the same type of organism. At the next kingdom level. This category in biological

D
level, the genus is a group of related species. classification systems includes the largest
Members of the same genus are very similar. number of related organisms.
(The genus Felis includes the domestic cat Biological classification offersa way to
and several other species, such as the ocelot.) organize almost 2 million different species of
Groups of similar genera (plural of genus) organisms into categories based on their
form a family. (The family Felidae includes evolutionary relationships. In addition, it also
many genera, such as cats and panthers.) provides a way to organize what we know
Families are organized in a large group about these species. Its power and usefulness
known as an order. Orders are grouped in that regard are easily illustrated. What
together in a class. And classes form still could you tell someone about the organism
larger categories known as phyla (singular, named Gyrodon merulloides? Not much,
phylum) or, for plants, as divisions. Figure probably. If you were told, however, that this
3.6 in the activity Using Unity to Organize organism is classified in the same major

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category as a mushroom, an image of its


a
general characteristics suddenly comes to
mind.
The usefulness of the species-to-kingdom
scheme also is illustrated by its enormous
lasting power. This system developed
gradually over about 100 years from the

Y
system of naming species that Swedish
botanist Carolus Linnaeus established in
1753. With some changes, the scheme still

P
is in use today. It has accommodated a
tremendous volume of new knowledge that
has been added in the past 200 years. And,

O
if biologists are correct in their estimates of
the number of species that remain to be b
discovered and described, we can expect it to

C
accommodate the data yet to be examined
and added.

T
O
N
c

O
D
Figure E3.30 Not all organisms reproduce
sexually or interbreed. (a) Strawberries develop
new plants at the ends of runners. (b) Bacteria
(Staphylococcus), photographed at 10,000, divide
into two new bacteria. (c) Yeast bud off new cells
(photographed at 600).

ESSAY: Organizing Diversity Unit 1 145

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