Abstract
An endophytic fungus, MC_25L, has been isolated from the leaves of MonardacitriodoraCerv. ex Lag., a medicinal and
aromatic herb from the northwestern Himalayas. It produces a fruity fragrance while growing on potato dextrose agar,
suggesting that it is producing volatile organic compounds (VOCs). The endophyte inhibited the growth of plant pathogens
such asSclerotiniasp. and Aspergillusflavus by virtue of VOCs. Identification of MC_25L based on morphological and
microscopic features, as well as ITS-based rDNA sequence analysis, revealed that it is a Fusariumsp. GC–MS analysis
revealed that this endophyte produces a unique array of VOCs, in particular hexanal, p-fluoroanisole, pentafluoropropionic
acid 2-ethylhexyl, (5E)-5-ethyl-2-methyl-5-hepten-3-one, 2-butyl-2-hexanol, (7E)-2-methyl-7-hexadecene and acoradiene.
Three major compounds were hexanal, (5E)-5-ethyl-2-methyl-5-hepten-3-one and acoradiene, and they account for around
84.57 % of the total VOCs. Moreover, of interest was the presence of hexanal, which has applications in the food and
cosmetic industries, as well as in mycofumigation. This is the first report of a fungal endophyte producing the industrially
important plant-like VOC hexanal. Hexanal is also active biologically. Thus this study indicates that Fusariumsp. (MC_25L) is a
potential candidate for the up-scaling of hexanal.
Quantification of hexanal
GC–MS analysis was carried out on an Agilent GC–MS
5975 C fitted with an HP-5 ms fused silica capillary col-
umn (30 m0.25 mm id, film thickness 0.25 µm). The
temperature programming of the oven was: from 50 to
250 C at a 5 C min 1 rising rate; then up to 280 C; then
hold for 2 min. Helium was used as the carrier gas, with a
flow rate of 1 ml min 1. Mass spectra were recorded over (b)
a 30–400 amu range at one scan per second with EI at
70 eV.
Identification of the hexanal was made by comparing the
mass spectra with those of the internal reference mass spec-
tra library (Wiley/NIST/Pfleger/) or with authentic com-
pound [procured from TCI chemicals (India) Pvt. Ltd], and
was confirmed by comparison of the retention indices with
those of authentic compounds or with those reported in the 50.0 µm
literature database.
Quantification of hexanal was carried using the external Fig. 1. (a) A colony morphology of MC_25L, an endophyte, associated
standard method. Excellent calibration curves were obtained in nature with Monarda citriodora, identified as Fusarium sp. growing
for hexanal in the concentration range 50.0–800.0 µg ml 1 on PDA. The fungus was found to produce a fruity fragrance. (b) Light
(R2 >0.999). The LOD and LOQ of hexanal were 9.9 and microscopic view of MC_25L at 400x.
38.8 µg ml 1, respectively.
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Katoch et al., Microbiology 2017;163:840–847
Fig. 2. Phylogenetic position of MC_25L. The evolutionary history was inferred using the neighbour-joining method. The percentage of
replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches.
The evolutionary distances were computed using the maximum-composite-likelihood method. Phylogenetic analyses were conducted
in MEGA4 [28].
1
growth inhibition of 52 % against Sclerotinia sp., followed by found for human microbial pathogens up to a 100 µg ml
50 % against A. flavus, 36.6 % against F. solani and 24.44 % concentration.
against A. fumigatus. They showed no growth inhibition
against C. capsici. These results suggest that the VOCs of
VOC production by MC_25L
MC_25L are not only active, but specific as well. The fungus, by virtue of a simple smell test, yielded a fruity
fragrance, indicating the production of VOCs. That the VOCs
Further, the culture filtrate assay displayed better activity of MC_25L possessed antagonistic activity against plant
(65 %) against Sclerotinia sp., suggesting that compounds pathogens was subjected to further study. For qualitative anal-
other than VOCs are also contributing towards the antago- ysis of the VOCs produced by this organism, it was grown on
nistic activity against Sclerotinia sp. This result suggested PDA and PDB for 10 days. Headspace analyses of solid and
that antagonistic metabolites are produced in greater quan- liquid culture of MC_25L were carried out. The DCM extract
tity. In contrast, the co-culture assay did not show any of MC_25L was also analysed through GC–MS and com-
antagonistic activity (50 %). This might be because pounds were identified on the basis of retention time and
MC_25L is producing molecules other than antagonistic peak mass compared with the NIST database information
ones or not diffusing through agar. (Table 2). A high match score value supports the results. This
The extract of MC_25L was also active against different endophyte produces a unique array of VOCs, in particular
human cancer lines HCT-116, A549, PC-3 and T47D,with hexanal, p-fluoroanisole, pentafluoropropionic acid 2-ethyl-
IC50 values 10–12.7 µg ml 1. However, no inhibition was hexyl, (5E)-5-ethyl-2-methyl-5-hepten-3-one, 2-butyl-2-hexa-
nol, (7E)-2-methyl-7-hexadecene and acoradiene (Fig. 3 and
Table 2). From GC–MS analysis, the relative percentage area
Table 1. The biological activity, represented as percentage antagonism or was calculated for each compound. Hexanal (RT 7.215 min)
growth inhibition, of MC_25L against a panel of fungal phytopathogens constituted about 43.9 % of the total VOCs, followed by (5E)-
Pathogen Antagonism percentage*
5-ethyl-2-methyl-5-hepten-3-one (RT 22.687, 15.9 %) and
acoradiene (RT 46.988 min, 24.6 %). Collectively, the aldehyde
Co-culture Culture filtrate VOCs present in the DCM extract of MC_25L comprised the great-
Fusarium solani 31.2 46.66 36.6
est percentage of total VOCs, followed by terpene and ketone.
Sclerotinia sp. – 65.21 50
Hexanal was confirmed and quantified (7.8 mg l 1) using its
standard (Figs 4, 5).
Colletotrichum capsici – 47.36 0
Aspergillus flavus 28.6 50 52
Aspergillus fumigatus 29.4 11 24.44
DISCUSSION
Fusarium sp. was found in this study to be associated with
*Antagonism values were calculated as the percentage of lateral growth
leaves of M. citriodora as an endophyte. It was identified
inhibition relative to the control test organism. The values are an average
of three similar observations. morphologically, microscopically and through ITS-based
rDNA sequence analysis. The VOCs of MC_25L showed
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Katoch et al., Microbiology 2017;163:840–847
HEXANAL
(7E)-2-Methyl-7-hexadecene
7.215 min
50
46.988 min
Acoradiene
40
2-Butyl-2-hexanol
23.908 min
p-Fluoroanisole
30
13.729 min
44.946 min
20
10
10 20 30 40 50 60 70 minutes
Seg 1 Seg 2, <No Description, Time: 4.00-77.00
655 1338 2021 2704 3388 4072 4755 Scans
Table 2. Volatile organic compounds (VOCs) produced by Fusarium sp., as determined by GC–MS
dominant compound released by plant material through the showed strong mortality to Meloidogyne incognita, a
lipoxygenase pathway after tissue disruption; it is used in nematode. No later report on its specific activity against
the food and cosmetic industries to produce fruity flavours nematodes was found in the literature [50]. Sanchez-Ortiz
[39]. Furthermore, it has been approved as a food additive et al. [51] reported that this compound is also responsible
by the US Food and Drug Administration (FDA) [40]. The for the antifungal and anti-oomycete activities. Fiers et al.
VOCs of MC_25L showed antagonistic activity against [52] also reported that the VOCs of F. culmorum, including
major phytopathogens, which might be attributed to the acoradiene, decreased the growth of Cochliobolus sativus by
presence of hexanal. Earlier studies also reported that its 13 to 17 % in barley. Singh et al. [49] reported its involve-
vapours suppress spore germination, mycelia growth and ment in antagonistic action, and its biofuel potential.
the fungal-derived cell-wall-degrading enzymes of posthar-
(7E)-2-methyl-7-hexadecene, a third major component of
vest pathogens [40–43]. Using hexanal as a fungicide
the present study, is also reported to be a VOC of Psoralea
presents lower human risks and animal toxicity, and causes
carylifolia L. (Cullen corylifolia). Other products of interest
less environmental pollution, while the research and devel-
include ketone [(5E)-5-ethyl-2-methyl-5-hepten-3-one] and
opment costs are lower than those for synthetic fungicides
acid (pentafluoropropionic acid, 2-ethylhexyl) [53]. Pro-
[44]. In industry, it is produced through either chemical
pionic acid, which contributes towards biological activity
processes or biotechnological interventions [45, 46]. Until
against plant pathogens, was reported from Nodulisporium
now, no endophyte was known to produce hexanal (associ-
sp. [54].
ated with fruity flavour and antagonistic potential) as part
of its VOCs. Another product of interest is 2-butyl-2-hexa- Another volatile compound was found in the DCM extract
nol. It is an alcohol that is also used in the flavouring indus- of MC_25L: p-fluoroanisole. It is widely used in the fertil-
try to produce fruity flavours. It is also a ‘green note’. izer, chemical and agricultural industries. Anisole or
methoxy benzene is a colourless liquid with a smell reminis-
Furthermore, acoradiene was present in the fungal VOCs as
cent of aniseed, and in fact many of its derivatives are found
a second major VOC (24.6 %). It is also a major VOC in the
in natural and artificial fragrances. 2,4,6-trichloroanisole
volatiles of F. oxysporum isolate 21, Fusarium sambucinum
(TCA) is a chemical compound that is a chlorinated deriva-
and Phomopsis sp. [47–49]. The volatiles of F. oxysporum
tive of anisole. TCA is a fungal metabolite of 2,4,6-trichloro-
phenol, which is used as a fungicide.
Hexanal In conclusion, in this study MC_25L produces a unique
Response range of industrially important VOCs that are also bioac-
tive. Although MC_25L (Fusarium sp.) is genetically (ITS
region) similar, it has the ability to produce VOCs that are
1.00e+005
different from those of other Fusarium spp. This is the first
report of a fungal endophyte producing the industrially
important plant-like VOC hexanal. Thus this study indi-
5.00e+004 cates that MC_25L is a potential candidate for the up-
scaling of hexanal.
0 Funding information
0 500 The research conducted in this paper was supported by the DBT spon-
sored project GAP1182 (BT/PR4669/PBD/17/784/2012), Government
Concentration (µg ml–1) of India.
Acknowledgements
Fig. 5. Calibration curve of hexanal. This article bears the Institutional Publication No. IIIM/2032/2017
GAP1182. We acknowledge the DBT, Govt of India, for financial
assistance and the Council of Scientific and Industrial Research (CSIR) 18. Scora RW. Study of the essential leaf oils of the genus Monarda
for providing the research platform. (Labiatae). Am J Bot 1967;54:446–452.
19. Collins JE, Bishop CD, Deans SG, Svoboda KP. Composition of the
Conflicts of interest essential oil from the leaves and flowers of Monarda citriodora
The authors declare that there are no conflicts of interest. var. citriodora grown in the United Kingdom. J Essent Oil Res 1994;
6:27–29.
Ethical statement 20. Dorman HJD, Deans SG. Chemical composition, antimicrobial and
This study does not include experiments on animals or humans. in vitro antioxidant properties of Monarda citriodora var. citriodora,
Myristica fragrans, composition and activity of Thymus fontanesii,
References Origanum vulgar ssp. hirtum, Pelargonium sp. and Thymus zygis
1. Croteau R. Biogenesis of flavor components: volatile carbonyl
oils. J Essent Oil Res 2004;16:145–150.
compounds and monoterpenoids. In: Hultin HO and Milner M (edi-
tors). Postharvest Biology and Biotechnology. Westport, CT, USA: 21. Zhan Guo L, Xui Hui L, Wei L. Chemical composition of antibacte-
Food and Nutrition Press; 1978. pp. 400–432. rial activity of essential oil from M. citriodora flowers. Adv Mat Res
2. Whitehead IM, Muller BL, Dean C. Industrial use of soybean lipox- 2011:183–185:920–923.
ygenase for the production of natural green note flavor com- 22. Pathania AS, Guru SK, Verma MK, Sharma C, Abdullah ST et al.
pounds. Cereal Foods World 1995;40:193–197. Disruption of the PI3K/AKT/mTOR signaling cascade and induction
3. Strobel GA, Knighton B, Kluck K, Ren Y, Livinghouse T et al. The of apoptosis in HL-60 cells by an essential oil from Monarda citrio-
production of myco-diesel hydrocarbons and their derivatives by dora. Food Chem Toxicol 2013;62:246–254.
the endophytic fungus Gliocladium roseum (NRRL 50072). 23. Strobel G, Daisy B. Bioprospecting for microbial endophytes and
Microbiology 2008;154:3319–3328. their natural products. Microbiol Mol Biol Rev 2003;67:491–502.
4. Tomsheck AR, Strobel GA, Booth E, Geary B, Spakowicz D et al. 24. Raeder U, Broda P. Rapid preparation of DNA from filamentous
Hypoxylon sp., an endophyte of Persea indica, producing 1,8-cine- fungi. Lett Appl Microbiol 1985;1:17–20.
ole and other bioactive volatiles with fuel potential. Microb Ecol
2010;60:903–914. 25. White TJ, Bruns T, Lee S, Taylor J. Amplification and direct
sequencing of fungal ribosomal RNA genes for phylogenetics. In:
5. Das A, Lee SH, Hyun TK, Kim SW, Kim JY. Plant volatiles as Innis M, Gelfand D, Sninsky J and White T (editors). PCR Protocols:
method of communication. Plant Biotechnol Rep 2013;7:9–26.
A Guide to Methods and Applications. San Diego: Academic Press;
6. Strobel G, Singh SK, Riyaz-Ul-Hassan S, Mitchell AM, Geary B 1990. pp. 315–322.
et al. An endophytic/pathogenic Phoma sp. from creosote bush
26. Katoch M, Singh G, Sharma S, Gupta N, Sangwan PL et al. Cyto-
producing biologically active volatile compounds having fuel
potential. FEMS Microbiol Lett 2011;320:87–94. toxic and antimicrobial activities of endophytic fungi isolated from
Bacopa monnieri (L.) Pennell (Scrophulariaceae). BMC Complement
7. Peng XW, Chen HZ. Microbial oil accumulation and cellulase Altern Med 2014;14:1–8.
secretion of the endophytic fungi from oleaginous plants. Ann
Microbiol 2007;57:239–242. 27. Altschul SF, Madden TL, Sch€ affer AA, Zhang J, Zhang Z et al.
Gapped BLAST and PSI-BLAST: a new generation of protein data-
8. Zhi-Lin Y, Yi-Cun C, Bai-Ge X, Chu-Long Z. Current perspectives base search programs. Nucleic Acids Res 1997;25:3389–3402.
on the volatile-producing fungal endophytes. Crit Rev Biotechnol
2012;32:363–373. 28. Tamura K, Dudley J, Nei M, Kumar S. MEGA4: molecular evolu-
tionary genetics analysis (MEGA) software version 4.0. Mol Biol
9. Yuan ZL, Zhang CL, Lin FC, Kubicek CP. Identity, diversity, and
Evol 2007;24:1596–1599.
molecular phylogeny of the endophytic mycobiota in the roots of
rare wild rice (Oryza granulate) from a nature reserve in Yunnan, 29. Lahlali R, Bajii M, Jijakli MH. Isolation and evaluation of bacteria
China. Appl Environ Microbiol 2010;76:1642–1652. and fungi as biological control agents against Rhizoctonia solani.
10. Minerdi D, Bossi S, Maffei ME, Gullino ML, Garibaldi A. Fusarium Commun Agric Appl Biol Sci 2007;72:973–982.
oxysporum and its bacterial consortium promote lettuce growth 30. Miles LA, Lopera CA, Gonz alez S, De García MCC, Franco AE et al.
and expansin A5 gene expression through microbial volatile Exploring the biocontrol potential of fungal endophytes from an
organic compound (MVOC) emission. FEMS Microbiol Ecol 2011;76: Andean Colombian Paramo ecosystem. BioControl 2012;57:697–
342–351. 710.
11. Schalchli H, Tortella GR, Rubilar O, Parra L, Hormazabal E et al. 31. Ezra D, Hess WM, Strobel GA. New endophytic isolates of Musco-
Fungal volatiles: an environmentally friendly tool to control patho- dor albus, a volatile-antibiotic-producing fungus. Microbiology
genic microorganisms in plants. Crit Rev Biotechnol 2016;36:144– 2004;150:4023–4031.
152.
32. Chamberlain K, Crawford DL. In vitro and in vivo antagonism of
12. Rodriguez R, Redman R. More than 400 million years of evolution pathogenic turfgrass fungi by Streptomyces hygroscopicus strains
and some plants still can’t make it on their own: plant stress tol- YCED9 and WYE53. J Ind Microbiol Biotechnol 1999;23:641–646.
erance via fungal symbiosis. J Exp Bot 2008;59:1109–1114.
33. Dennis C, Webster J. Antagonistic properties of species-groups of
13. Zhao J, Shan T, Mou Y, Zhou L. Plant-derived bioactive com-
Trichoderma I. Production of volatile antibiotics. Trans Br Mycol
pounds produced by endophytic fungi. Mini Rev Med Chem 2011;
11:159–168. Soc 1971;57:25–39.
14. Stierle A, Strobel G, Stierle D. Taxol and taxane production by 34. McCloud TG. High throughput extraction of plant, marine and fun-
Taxomyces andreanae, an endophytic fungus of Pacific yew. gal specimens for microbiomes. Annu Rev Phytopathol 2010;49:
Science 1993;260:214–216. 291–315.
15. Kudalkar P, Strobel G, Riyaz-Ul-Hassan S, Geary B, Sears J. Mus- 35. Strobel G. Harnessing endophytes for industrial microbiology.
codor sutura, a novel endophytic fungus with volatile antibiotic Curr Opin Microbiol 2006;9:240–244.
activities. Mycoscience 2012;53:319–325. 36. Santos JER, Villarino BJ, Zosa AR, Dayrit FM. Analysis of volatile
16. Pupo MT, Guimaraes DO, Furtado N, Borges WS. Microbial natural organic compounds in virgin coconut oil and their sensory attrib-
products: a promising source of bioactive compounds. In: Taft CA utes. Philipp J Sci 2011;140:161–171.
(editor). Modern Biotechnology in Medicinal Chemistry and Industry. 37. Buśko M, Kulik T, Ostrowska A, Góral T, Perkowski J. Quantitative
Kerala, India: Research Signpost; 2006. pp. 51–78. volatile compound profiles in fungal cultures of three different
17. Garrett H, Brannam O. Herbs for Texas. University of Texas Press; Fusarium graminearum chemotypes. FEMS Microbiol Lett 2014;
2001. pp. 112–113. 359:85–93.
38. de Lacy Costello BPJ, Evans P, Ewen RJ, Gunson HE, Jones PRH 47. Freire ES, Campos VP, Oliveira DF, Pohlit AM, Noberto NP et al.
et al. Gas chromatography-mass spectrometry analyses of volatile Volatile substances on the antagonism between fungi, bacteria
organic compounds from potato tubers inoculated with Phytoph- and Meloidogyne incognita and potentially fungi for nematode con-
thora infestans or Fusarium coeruleum. Plant Pathol 2001;50:489– trol. J Nematol 2010, in press.
496. 48. Jelen HH, Mirocha CJ, Wasowicz E, Kami nski E. Production of vol-
39. Vick BA, Zimmermann DC. Oxidative systems for modification of atile sesquiterpenes by Fusarium sambucinum strains with differ-
fatty acids: the lipoxygenase pathway. In: Stumpf PK (editor). The ent abilities to synthesize trichothecenes. Appl Environ Microbiol
Biochemistry of Plants, vol. 9. UK: Academic Press; 1987. pp. 53– 1995;61:3815–3820.
90. 49. Singh SK, Strobel GA, Knighton B, Geary B, Sears J et al. An
40. Song J, Leepipattanawit R, Deng W, Beaudry RM. Hexanal vapor endophytic Phomopsis sp. possessing bioactivity and fuel potential
is a natural, metabolizable fungicide: inhibition of fungal activity with its volatile organic compounds. Microb Ecol 2011;61:729–739.
and enhancement of aroma biosynthesis in apple slices. J Am Soc 50. Freire ES, Campos VP, Pinho RS, Oliveira DF, Faria MR et al. Vola-
Hort Sci 1996;121:937–942. tile substances produced by Fusarium oxysporum from coffee rhi-
41. Thavong P, Archbold DD, Pankasemsuk T, Koslanund R. Hexanal zosphere and other microbes affect Meloidogyne incognita and
vapours suppress spore germination, mycelial growth, and fun- Arthrobotrys conoides. J Nematol 2012;44:321–328.
gal-derived cell wall degrading enzymes of postharvest pathogens 51. S
anchez-Ortiz BL, S anchez-Fernandez RE, Duarte G, Lappe-
of Longan Fruit. Chiang Mai J Sci 2011;38:139–150. Oliveras P, Macías-Rubalcava ML. Antifungal, anti-oomycete and
42. Baggio JS, Lourenço SA, Amorim L. Eradicant and curative treat- phytotoxic effects of volatile organic compounds from the endo-
ments of hexanal against peach brown rot. Scientia Agricola 2014; phytic fungus Xylaria sp. strain PB3f3 isolated from Haematoxylon
71:72–76. brasiletto. J Appl Microbiol 2016;120:1313–1325.
43. Song J, Hildebrand PD, Fan L, Forney CF, Renderos WE et al. 52. Fiers M, Lognay G, Fauconnier ML, Jijakli MH. Volatile compound-
Effect of hexanal vapor on the growth of postharvest pathogens mediated interactions between barley and pathogenic fungi in the
and fruit decay. J Food Sci 2007;72:M108–M112. soil. PLoS One 2013;8:e66805.
44. Tripathi P, Dubey NK. Exploitation of natural products as an alter- 53. Strobel GA, Dirkse E, Sears J, Markworth C. Volatile antimicro-
native strategy to control postharvest fungal rotting of fruit and bials from Muscodor albus, a novel endophytic fungus.
vegetables. Postharvest Biol Tech 2004;47:434–437. Microbiology 2001;147:2943–2950.
45. Marczy JS, Nemeth ÁS, Samu Z, Ádam HV, Szaj ani B. Produc- 54. Riyaz-Ul-Hassan S, Strobel G, Geary B, Sears J. An endophytic
tion of hexanal from hydrolyzed sunflower oil by lipoxygenase Nodulisporium sp. from Central America producing volatile organic
and hydroperoxide lyase enzymes. Biotechnol Lett 2002;24: compounds with both biological and fuel potential. J Microbiol
1673–1675. Biotechnol 2013;23:29–35.
46. Santiago-Gómez MP, Thanh HT, De Coninck J, Cachon R,
Kermasha S et al. Modeling hexanal production in oxido-reducing
conditions by the yeast Yarrowia lipolytica. Process Biochem 2009;
44:1013–1018. Edited by: A. H. Herrera-Estrella and V. J. Cid
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