Course Requirements/Recommendations:
1) Attend lectures 2) Readings a) Class handouts required readings b) Textbooks i) Medical Physiology by Boron and Boulpaep ii) Physiology by Berne and Levy
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PHYSIOLOGY BOOKS
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Human Physiology
Study of how the human body functions. Pathophysiology: How physiological processes are altered in disease or injury.
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Goal of this course: 1) To understand cellular physiology 2) To understand how each organ system works to maintain the composition, volume and pressure of the extracellular fluid. 3) Understanding from the whole human body level to the molecular level
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What is Physiology?
Focuses on homeostasis, the maintenance of important properties of living organisms in a narrow range in the face of significant environmental fluctuations Examples of properties blood pressure ionic composition of blood osmolarity of blood oxygen and carbon dioxide content of blood acid-base balance of blood glucose concentration of blood body temperature Goals are to identify the processes that control and regulate the important properties of living systems sensors afferent pathways integrating centers - set points effectors efferent pathways How do these systems respond to perturbations in order to return to normal?
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What is Physiology?
Focuses on homeostasis, the maintenance of important parameters in living organisms in a narrow range (in the steady state) in the face of significant environmental fluctuations
Example: body temperature Sweat Ducts elevated Sweating
normal range
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Shivering
decreased
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Elements
Four elements important to living organisms Carbon (C) Nitrogen (N) Oxygen (O) Hydrogen (H)
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Lipids
GR: Lipos=Fat Diverse group of molecules. Insoluble in polar solvents (H20). Hydrophobic (nonpolar) Consist primarily of hydrocarbon chains and rings.
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Lipids
Hydrocarbons Fatty acids Triglycerides Ketone Bodies Phospholipids Steroids Prostaglandins
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Carbohydrates
Organic molecules that contain carbon, hydrogen and oxygen. CH20 General formula: CnH2nOn -ose denotes a sugar molecule
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Carbohydrates
Supply energy
Glucose Complex carbohydrates
Carbohydrates
Monosaccharide: the simple sugars
Pentoses (5-carbons):
Ribose: in RNA Deoxyribose: in DNA
Carbohydrates
Disaccharide: 2 monosaccharides joined covalently.
Sucrose
Glucose and fructose
Maltose
Glucose and glucose
Lactose
Glucose and galactose
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Carbohydrates
Polysaccharides: Many monosaccharides joined covalently. General formula: (C6H10O5)n Characteristics:
Devoid of taste Do not form solutions Iodine test
Iodine +starch+blue
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Polysaccarides
Kinds:
Starch
Glucose subunits branched
Cellulose
Glucose subunits Long, unbranched chains
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Proteins
General Information: GR: proteios=first rank ~50% of the organic material of the body Functions
Structural:
Cell structures, CTs
Functional:
Enzymes, hormones, Hb, etc!
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Proteins
Protein Structure Large molecules (polymers) composed of amino acid sub-units (monomers). Amino Acid structure
amino group (NH2) carboxylic acid group (COOH) Radical group (R): functional group H
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Proteins
20 different standard amino acids. Based on the properties of the functional group E.g.:
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Proteins
Dipeptide: 2 amino acids Tripeptide: 3 amino acids Polypeptide: many amino acids
Number of amino acids varies Up to 100 aa
Protein
Over 100aa Great variety!
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Conjugated proteins
Protein combined with another type of molecule Glycoproteins: carbohydrate with protein
Membranes, hormone
Nucleic Acids
Include the macromolecules:
DNA: deoxyribonucleic acid RNA: ribonucleic acid
Nucleic Acids
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Nucleotides
Structure of a nucleotide: 3 subunits
Pentose sugar Phosphate group Nitrogenous base
Purines: two rings
Guanine Adenine
Nucleotide Structure
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DNA
Huge molecules with simple structure Big time data storage! Structure
Nucleotides
Pentose sugar: Deoxyribose Bases:
Purines: G and A Pyrimidines: C and T
DNA
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RNA
Means by which DNA directs cellular activities Structure
Pentose sugar: ribose Bases: uracil (not thymine) Single stranded
DNA vs RNA
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Cell
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Primary Tissues
4 Different Primary Tissues: Muscle Nervous Epithelial Connective
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Muscle Tissue
Specialized for contraction. 3 Types of Muscle Tissue: Skeletal Cardiac Smooth
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Connective Tissue
Large amounts of extracellular (ECF) material in the spaces between connective tissue cells. 4 Types of Connective Tissue:
Connective tissue proper Cartilage Bone Blood
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Irregularly arranged.
Resists forces applied in many directions.
Capsules and sheaths
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Organs
Organs:
Composed of at least two primary tissues. Serve different functions of the organ.
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Systems
Organs that are located in different regions of the body and perform related functions. Examples:
Skeletal system Cardiovascular system GI system
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Cell
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Cell (continued)
Great diversity of function.
Organ physiology derived from complex functions of the cell.
3 principal parts:
Plasma membrane. Cytoplasm and organelles. Nucleus.
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o The
cell has two major compartments: the nucleus & the cytoplasm. The cytoplasm contains the major cell organelles & a fluid called cytosol.
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Component
Cell membrane
Structure
Membrane composed of double layer of phospholipids in which proteins are embedded Fluid, jellylike substance b/w cell membrane & nucleus in which organelles are suspended Double-layered membrane that surrounds nucleus, composed of protein & lipid molecules Dense nonmembranous mass composed of protein & RNA molecules Fibrous strands composed of protein & DNA
Function
Surrounds, holds cell together & gives its form; controls passage of materials into & out of cell Serves as matrix substance in which chemical reactions occur.
Cytoplasm Nucleus:
- Nuclear envelope - Nucleolus
Supports nucleus & controls passage of materials b/w nucleus & cytoplasm Produces ribosomal RNA for ribosomes
- Chromatin
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Contains genetic code that determines which proteins (including enzymes) will be manufactured by the cell
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(continued)
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Cytoskeleton:
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Organelles
Subcellular structures within the cytoplasm that perform specific functions.
o Mammalian cell showing organelles common to all cells and specialized structures (e.g., cilia) found only in some cells. AP Biology
Component
Endoplasmic reticulum Ribosomes
Structure
System of interconnected membrane-forming canals & tubules Granular particles composed of protein & RNA membranous sacs
Function
Agranular (smooth) ER metabolizes nonpolar compounds & stores Ca2+ in striated muscle cells; granular (rough) ER assists in protein sysnthesis Synthesize proteins
Synthesizes carbohydrates & packages molecules for secretion. Secretes lipids & glycoproteins Release energy from food molecules & transform energy into usable ATP Digest foreign molecules & damaged organelles
Component
Peroxisomes Centrosome Vacuoles
Microfilaments & microtubules
Structure
Spherical membranous vesicles
Function
Contain enzymes that detoxify harmful molecules & break down hydrogen peroxide
Nonmembranous mass Helps to organize spindle fibers & distribute of 2 rodlike centrioles chromosomes during mitosis Membranous sacs Store & release various substances within the cytoplasm Support cytoplasm & fx as cytoskeleton, transport materials within the cytoplasm Move particles along cell surface, or move the cell
Thin, hollow tubes Minute cytoplasmic projections that extend from the cell surface
Cell Nucleus
Is a large spheroid body. Largest of organelles. Contains the genetic material (DNA). Most cells have a single nucleus. Enclosed by inner & outer membrane (nuclear envelope).
Outer membrane is continuous w ER.
Cell Nucleus
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Chromatin:
Threadlike material that makes up chromosomes.
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Plasma membrane:
Surrounds, holds cell together and gives its form. 10 nanometer thick. Not solid. Separates cell s internal structures from extracellular environment. Is selectively permeable, controls passage of materials into and out of cell. Participates in intracellular communication.
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Carbohydrates 3%
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WATER
WATER
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Phospholipids
Fatty acid tails hydrophobic Phosphate group head hydrophilic Arranged as a bilayer
Phosphate
Fatty acid
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Fluid
Viscous
Cholesterol
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Hydrophilic molecules
Do not cross the membrane rapidly
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Membrane is a collage of proteins & other molecules embedded in the fluid matrix of the lipid bilayer
Extracellular fluid
Glycolipid
Glycoprotein
Cytoplasm
Glycolipid
EXTRACELLULAR SIDE OF MEMBRANE
Microfilaments of cytoskeleton
Cholesterol
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Peripheral protein
Integral protein
Why are proteins the perfect molecule to build structures in the cell membrane?
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Cell adhesion
(c)
Signal transduction. A membrane protein may have a binding site with a specific shape that fits the shape of a chemical messenger, such as a hormone. The external messenger (signal) may cause a conformational change in the protein (receptor) that relays the message to the inside of the cell.
Signal
Receptor
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(d)
Cell-cell recognition. Some glyco-proteins serve as identification tags that are specifically recognized by other cells.
Glycoprotein
(e)
Intercellular joining. Membrane proteins of adjacent cells may hook together in various kinds of junctions, such as gap junctions or tight junctions
(f)
Attachment to the cytoskeleton and extracellular matrix (ECM). Microfilaments or other elements of the cytoskeleton may be bonded to membrane proteins, a function that helps maintain cell shape and stabilizes the location of certain membrane proteins. Proteins that adhere to the ECM can coordinate extracellular and intracellular changes .
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3 4 Secreted protein Plasma membrane: Cytoplasmic face Extracellular face Transmembrane glycoprotein
Membrane glycolipid
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Membrane carbohydrates
Interact with the surface molecules of other cells, facilitating cell-cell recognition
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Membrane carbohydrates
Play a key role in cell-cell recognition ability of a cell to distinguish one cell from another antigens important in organ and tissue development basis for rejection of foreign cells by immune system (ex. HLA SYSTEM).
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Lipid or fat-soluble substances, e.g. O2, CO2, OH; enter directly into cell membrane through the lipid bilayer. Water-soluble substances, e.g. ions, glucose, water; enter through proteins of the cell membrane.
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Active transport:
Requires ATP.
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2. Active transport
o
2. Active transport
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Diffusion
Move from HIGH to LOW concentration passive transport no energy needed
movement of water
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diffusion
osmosis
NO!
OUT OUT IN
waste ammonia salts CO2 H 2O products
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sugar aa
H 2O
salts, ammonia
large molecules
starches, proteins
inside cell
H 2O
aa
sugar
NH3 AP Biology
salt
outside cell
Facilitated Diffusion
Diffusion through protein channels channels move specific molecules across cell membrane facilitated = with help no energy needed
open channel = fast transport high
low
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The Bouncer
The Special Case of Water Movement of water across the cell membrane
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Concentration of water
Direction of osmosis is determined by comparing total solute concentrations Hypertonic - more solute, less water Hypotonic - less solute, more water Isotonic - equal solute, equal water
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hypertonic
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freshwater
balanced
saltwater
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balanced
vacuole
ATP
Aquaporins
Water moves rapidly into & out of cells evidence that there were water channels
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Peter Agre
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John Hopkins
Roderick MacKinnon
Rockefeller
Active transport:
Protein-Carrier mediated transport. Involves net transport (uphill), i.e. against electrochemical gradient (from lower to higher conc). Requires metabolic energy (ATP).
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Active Transport
Cells may need to move molecules against concentration gradient shape change transports solute from one side of membrane to other protein pump conformational change costs energy = ATP low
ATP
high
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The Doorman
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Primary active transport (continued) Examples: a. Sodium-Potassium pump (Na+/K+ pump). b. Primary active transport of calcium (Ca2+ ATPase). c. Primary active transport of hydrogen ions (H+/K+ ATPase)
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Sodium-Potassium pump (Na+/K+ pump): Present in most cell membranes. e.g. in basolateral membrane of the kidneys, & in intestines. Energy dependent transport, because both ions are moved against their conc gradient.
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Na+/K+ Pump
Is also an ATP enzyme that converts ATP to ADP and Pi. Actively extrudes 3 Na+ & transports 2 K+ inward against conc gradient. Steep gradient serves 4 fxs: Provides energy for coupled transport of other molecules. Regulates resting calorie expenditure & BMR. Involvement in electrochemical impulses. Promotes osmotic flow.
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a. Co-transport (Symport)
All solutes move in the same direction to the inside of the cell e.g. - Na+ glucose Co transport - Na+ amino acid Co transport In the intestinal tract, & kidney s brush borders.
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Active transport
Many models & mechanisms
ATP
ATP
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antiport
symport
active transport
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ATP
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Bulk Transport
Receptor-mediated endocytosis:
Interaction of molecules in ECF with specific membrane receptor proteins. Membrane invaginates, fuses, pinches off and forms vesicle. Vesicle enters cell.
Exocytosis:
Process by which cellular products are secreted into extracellular environment. Proteins and other molecules to be secreted are packaged in vesicles by Golgi complex. Vesicles fuse with plasma membrane and release contents into extracellular environment. AP Biology
Endocytosis
Phagocytosis:
Phagocytic cells use pseudopods to surround and engulf particles. Pseudopods join, fuse, and surround ingested particle (food vacuole). Lysosomes digest food vacuole. Protects from invading organisms. Removes debris.
Pinocytosis:
Nonspecific process. Plasma membrane invaginates, fuses, vesicle containing ECF pinches off, and vesicle enters cell.
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Endocytosis
fuse with lysosome for digestion
phagocytosis
pinocytosis
non-specific process
PHAGOCYTOSIS
EXTRACELLULAR FLUID CYTOPLASM Pseudopodium 1 m
In pinocytosis, the cell gulps droplets of extracellular fluid into tiny vesicles. It is not the fluid itself that is needed by the cell, but the molecules dissolved in the droplet. Because any and all included solutes are taken into the cell, pinocytosis is nonspecific in the substances it transports.
PINOCYTOSIS
Plasma membrane 0.5 m
Pinocytosis vesicles forming (arrows) in a cell lining a small blood vessel (TEM)
Vesicle
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Receptor-mediated endocytosis
enables the cell to acquire bulk quantities of specific substances, even though those substances may not be very concentrated in the extracellular fluid. Embedded in the membrane are proteins with specific receptor sites exposed to the extracellular fluid. The receptor proteins are usually already clustered in regions of the membrane called coated pits, which are lined on their cytoplasmic side by a fuzzy layer of coat proteins. Extracellular substances (ligands) bind to these receptors. When binding occurs, the coated pit forms a vesicle containing the ligand molecules. Notice that there are relatively more bound molecules (purple) inside the vesicle, but other molecules (green) are also present. After this ingested material is liberated from the vesicle, the receptors are recycled to the plasma membrane by the same vesicle.
RECEPTOR-MEDIATED ENDOCYTOSIS
Coat protein Receptor Coated vesicle
Ligand
Coated pit
Coat protein
A coated pit and a coated vesicle formed during receptormediated endocytosis (TEMs).
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