Flora
Resident flora
always present, usually without altering the clients
health.
Includes bacteria, fungi, protozoa, viruses and
arthropods
large intestine has the highest numbers of
bacteria.
Internal organs and tissues and fluids are microbefree.
benefit host by preventing overgrowth of harmful
2
microbes microbial antagonism.
Distribution of pathogen
Infections often described according to distribution within
the body
Localized
Infection limited to small area
Example = boil
Systemic or generalized
Agent has spread or disseminated throughout the body
Example = measles
Toxemia
Toxins circulating in blood
Viremia
Viruses circulating in blood
Septicemia
Acute life-threatening illness causes by infectious agent or its products
circulating in blood
Duration of Symptoms
Acute
Symptoms have rapid
onset and last only short
time
Chronic
Symptoms develop slowly
and persist
Latent
Infection never completely
eliminated
Infection becomes reactive
Infection Process
Six elements must be present for infection to occur:
Infectious agent
Reservoir
Exit
Method of transportation
Entrance
Host
12
The Chain
of
Infection
2. Colonization
Usually at the site of entry
3. Incubation Period
Asymptomatic period
Between the initial contact with the
microbe and the appearance of the first
symptoms
5. Invasive period
Increasing Severity of Symptoms
Fever
Inflammation and Swelling
Tissue Damage
Infection May Spread to Other Sites
PORTAL OF EXIT
How infectious agent leaves the reservoir:
Sputum.
Semen, vaginal secretions, and urine.
Saliva and feces.
Blood.
Draining wounds.
Tears.
Method of Transmission
Once a microorganism has exited a reservoir there
are many vehicles.
These vehicles are called contaminated, soiled or
stained.
MODES OF TRANSMISSION
Movement of infectious agent from reservoir or
source through portal of exit to portal of entry of
susceptible host:
Contact transmission.
Airborne transmission.
Vehicle transmission.(Water,food)
Vector-borne transmission. (Mechanical, Biological)
Zoonoses
diseases transmitted directly from animals to humans, or indirectly
from animals by insect vectors. ex. Malaria and Yellow Fever have
a monkey reservoir. Wild and domestic animals are carriers for
many human infectious diseases. Zoonoses include diseases
transmitted by feathers, hides, or furs to humans.
PORTAL OF ENTRY
How an infectious agent enters the host:
Integumentary system.
Respiratory tract.
Genitourinary tract.
Gastrointestinal tract.
Circulatory system.
Transplacental.
Entrance of Microorganisms
Once an organism has exited one host and been transmitted,
it must find a way to enter a susceptible host.
When a hosts defense mechanisms are reduced, there is a
greater chance of the organism to enter.
Age
Concurrent diseases
Stress
Immunization/vaccination status
Lifestyle and occupation
Nutritional status
Heredity
27
28
SEVEN MECHANISMS OF
PATHOGENESIS
1. Maintain a reservoir in humans
(carriers), animals (zooneses), water,
soil, dust etc.
2. Adherance hooks, spikes, tacky chems
3. Anti-phagocytic properties: capsule,
Wax D, M-protein in Streptococcus
pyogenes, and antigenic drift in
Influenza (virus), Neisseria (bacteria),
and Trypanosomes (protozoan).
5. SIDEROPHORES
Most pathogens obtain iron from the host by
secreting these low molecular weight proteins
into the blood which strip iron from
transferrin, a glycoprotein in the blood.
Exotoxins Endotoxins
Secreted to attack
specific targets
Toxic in small
amounts
Polypeptide
composition
Unstable at 60 C
Convert to toxoid
Stimulate antitoxins
No fever
What is Sterilization?
Sterilization (in Microbiology) :
1. To completely remove all kinds of microbes (bacteria,
mycobacteria, viruses, & fungi) by physical or chemical
methods.
2. Effective to kill bacterium spores
3. Sterilant: material or method used to remove or kill all
microbes
What is Disinfection?
Disinfection (in Microbiology) :
1. To kill most of microbial forms except some resistant organisms or
bacterium spores
2. Categorizing: High-level sterilization
Intermediate-level
Low level
High-level disinfectants
Used for items involved in invasive procedures but NOT withstand
sterilization, e.g. Endoscopes, Surgical instruments
Intermediate-level disinfectants
Used for cleaning surface or instruments without bacterial
spores and highly resilient organism, eg. Laryngoscopes,
Anesthesia breathing circuitsetc
Low-level disinfectants
Used to treat noncritical instruments and devices, not
penetrating into mucosa surfaces or sterile tissues
Considerations of Disinfection
Effectiveness of disinfectants is influenced by
1. Nature of the item to be disinfected
2. Number and resilience of the contaminants
3. Amount of organic material present
4. Type and concentration of disinfectant
5. Duration and temperature of exposure
Physical methods
Back
B. stearothermophilus spores
Dry heat
Dry oven: 160 oC for 2 hrs or 171 oC for 1 hr. (B. subtilis)
Flaming; incineration
Radiation
UV-light: UV-radiation causes
damage to DNA.
Ionizing radiation: less applicable.
Filtration
The pore size for filtering bacteria,
yeasts, and fungi is in the range of
0.22-0.45 mm (filtration membranes
are most popular for this purpose).
HEPA filters
Antibacterial agents
1. A useful chemotherapeutic agent should have in vivo
effectiveness and selective toxicity.
2. Modes of action of the chemotherapeutic agents
Inhibition of:
cell wall synthesis
protein synthesis
nucleic acid synthesis
(cell membrane function)
Disruption
of cell wall
Sites of antibiotic
activity
Penicillins
Produced by Penicillium chrysogenum
Modifications:
decrease acid lability;
increase absorption;
resistant to penicillinase;
broader spectrum (e.g., ampicillin).
-lactamase inhibitors: bind -lactamases irreversibly;
combined use with some penicillins to increase
effectiveness.
Modifications of cephalosporins were to expand their
spectra or increase their stability to -lactamases.
Vancomycin
A complex glycopeptide produced by Streptomyces orientalis
Interacts with D-ala-D-ala termini of the pentapeptide side chains
Inactive for gram-negative bacteria
Some enterococci have acquired resistance to vancomycin
The resistance genes are carried on plasmids
Polymyxins
1. Cyclic polypeptides (from Bacillus polymyxa)
2. Insert into bacteria outer membrane by interacting with LPS and
phospholipids increase cell permeability bacterial cell death
3. Most Active for gram-negative bacteria, because Gram-pos bacteria
have no outer member
4. Nephrotoxic
5. External treatment of localized infection and oral administration to
sterilize the gut
Chromosomal
Extrachromosomal
(e.g., R plasmids)
Can be transferred
by conjugation,
transformation, and
transduction.
Recommendations
Cleaning
All objects to be disinfected or sterilized should first be
thoroughly cleaned to remove all organic matter (blood
and tissue) and other residue.
Indications for Sterilization and High-Level
Disinfection
Critical medical devices or patient-care equipment
that enter normally sterile tissue or the vascular
system or through which blood flows should be
subjected to a sterilization procedure before each
use.
Laparoscopes, arthroscopes, and other scopes that
enter normally sterile tissue should be subjected to a
sterilization procedure before each use; if this is not
feasible, they should receive at least high-level
disinfection.
Treatment of Infection
Pathogen
Bacterial
Virus
Fungi
Disinfectants
chemical solutions that are known to destroy microorganisms or their
toxins on inanimate objects.
Antiseptics
chemicals applied to the skin that do not usually cause tissue
damage, such as isopropyl alcohol-70%; generally affects organisms
on the surface
75
Basic elements
Cleaning
Disinfecting
Packaging
Sterilizing
Storage
76
Cleaning
77
How to
Mechanical process
Friction
Detergent
Make fats soluble or isolate
Carrier (water)
Detailed
Use standard process
Monitor activity
Use only the very best products
78
Essential components
Surfactant decreases surface tension permitting
water and detergent to disperse throughout area.
Precipitants condense metallic ions to prevent
them from effecting process.
Chemical buffers maintain the pH of the
cleaning solution to maximize the effect of the
detergent.
79
80
A. Aluminum
low alkaline detergent.
manually cleaning use a motion in the direction of the grain, rather than a circular
motion against the grain.
B. Glassware
washed with low alkaline detergent.
Rinse with large amounts of water.
final rinse, use distilled water, or demineralized water.
C. Rubber goods
should be scrubbed thoroughly with soft fiber brush
detergent should be low alkaline.
Thorough rinsing is essential, and followed by air-drying.
Disinfecting
A process that eliminates living pathogenic
microorganisms on inanimate objects
Does not work on most virus
Does not work on most spores
Does not work on prion?
May have other limits (high level vs. low level)
82
Characteristics of a disinfectant
83
84
Quaternary ammonium
Specific pathogen approvals (read the label!)
Affected by water hardness
Affected by bioburden
85
Halogens
Iodine (Iodophore)
Good killer usable in food preparation
Inactivated by organic materials (blood)
Stains
Chlorine
Good killer usable in food preparation
Inactivated by organic materials (blood)
Corrosive
Bleach!
86
Other products
Chloramine-T
Retains more chlorine
More bactericidal
Alcohol
Not sporicidal
Flammable
Incompatible with many items
87
Other products
Aldehydes
Gluteraldehyde
88
Newer products
Hydrogen peroxide
Oxidizer (may harm some instruments)
Reverts to hydrogen and oxygen (safe?)
Peracetic acid
Rapid action but smells bad (vinegar)
Works in presence of organic materials
89
Sterilization
Steam
Dry Heat
Ethylene Oxide
Gluteraldehyde
Peracetic Acid
Plasma Gas (vapourized hydrogen peroxide)
90
Figure 20.2
Figure 20.4
Penicillin
Natural penicillins
Semisynthetic penicillins
Extended-spectrum penicillins
Vancomycin
Glycopeptide
Important "last line" against antibiotic-resistant
S. aureus
Ethambutol
Inhibits incorporation of mycolic acid
Figure 20.10
Figure 20.11
Figure 20.12
Competitive Inhibitors
Sulfonamides (sulfa drugs)
Inhibit folic acid synthesis
Broad spectrum
Figure 5.7b
Figure 20.13
Antifungal Drugs
Inhibition of ergosterol synthesis
Polyenes
Amphotericin B
Figure 20.14
Antifungal Drugs
Inhibition of cell wall synthesis
Echinocandins
Inhibit synthesis of -glucan
Cancidas is used against Candida and
Pneumocystis
Antifungal Drugs
Azoles
Miconazole
Triazoles
Allylamines
For azole-resistant
infections
Figure 20.15
Pentamidine isethionate
Anti-Pneumocystis; may bind DNA
Tolnaftate
Action unknown
Antiviral Drugs
Nucleoside and nucleotide analogs
Figure 20.16a
Antiviral Drugs
Protease inhibitors
Indinavir: HIV
Integrase inhibitors
HIV
Inhibit attachment
Zanamivir: Influenza
Block CCR5: HIV
Inhibit uncoating
Amantadine: Influenza
Enzyme Inhibitors
Fusion inhibitors
Enfuvirtide: HIV
Inhibit attachment
Zanamivir: Influenza
Inhibit uncoating
Amantadine: Influenza
Interferons
Prevent spread of viruses to new cells
Alpha interferon: Viral hepatitis
Imiquimod
Promotes interferon production
Antiprotozoan Drugs
Chloroquine
Inhibits DNA synthesis
Malaria
Diiodohydroxyquin
Unknown mode of action
Amoebic diseases
Antiprotozoan Drugs
Metronidazole
Damages DNA
Entamoeba, Trichomonas
Nitazoxanide
Interferes with metabolism of anaerobes
Antihelminthic Drugs
Niclosamide
Prevents ATP generation
Tapeworms
Praziquantel
Alters membrane
permeability
Flatworms
Figure 12.26
Antihelminthic Drugs
Mebendazole
Inhibits nutrient
absorption
Intestinal roundworms
Ivermectin
Paralyzes worm
Intestinal roundworms
Figure 12.28a
Resistance to Antibiotics
Figure 20.20
Antibiotic Resistance
A variety of mutations can lead to antibiotic
resistance
Mechanisms of antibiotic resistance
1.
2.
3.
4.